Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15 248 1e-60 seq1 102 1e-16 >seq15 Length=644973 Score = 248 bits (274), Expect = 1e-60 Identities = 1132/1763 (64%), Gaps = 63/1763 (4%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || || |||||||| || || || | || || Sbjct 161428 CCGCAGCACATGATTATGCGTGTTGCTGTCGGTATCTGGGGTGACAATGTAGAGAAGGTC 161369 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATC---CACGCAACACCAACCCTC 111728 | ||||| ||| || ||||| ||| | | | || || || | |||||||| Sbjct 161368 ATTGAGACCTACAACCTCATGTC---TGGCAAATACTTCACTCATGCCTCCCCAACCCTT 161312 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||||||||||||||| | || | || || |||||| | | | ||||| Sbjct 161311 TTCAACGCTGGTACACCTCAGGCGCAGCTTTCATCCTGCTTCCTTGTCGATATGAAGGAT 161252 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 ||| ||| | || || |||| || || | ||||| ||||| ||| ||| Sbjct 161251 GATAGCATCGAGGGTATCTACGATACCCTGAAAACTTGTGCTATGATCTCCAAGATGGCC 161192 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTA 111906 ||||||||||| || | |||||| | | | |||| | |||||| | | |||| Sbjct 161191 GGTGGTATCGGTTTGAATATCCATCGTATTCGTGCCACT--GGCTCGTACATCGCCGGTA 161134 Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 | || || || ||||||| | || ||||| || || || ||| ||| ||| | | Sbjct 161133 CTAACGGAACGTCCAATGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACCGCGAGAT 161074 Query 111967 ATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 |||| | || | ||| ||| || || || | || |||| | ||||| | Sbjct 161073 ATGTTGATCAGGGTGGCAACAAGCG--GCCTGGTGCCTTTGCCA-TCTACTTGGAGCCGT 161017 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||| ||||| | | ||||||||||| | ||| ||||| ||| | ||||| | | Sbjct 161016 GGCACTCGGATGTTTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGA-GATC 160958 Query 112081 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 |||| ||||| |||||| ||||| |||||||| || || ||||||||| | || ||| Sbjct 160957 CGTGCTCGCGACCTCTTCCTTGCTCTTTGGATTCCCGACCTTTTCATGAAGCGTGTCGAG 160898 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| ||| | ||| ||||| | || || || || || || || |||||| | Sbjct 160897 AAGAACGGCGAGTGGACTCTCATGTGCCCGAACGAGTGCCCTGGCCTAGCCGATGTCTAC 160838 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259 ||||| ||||| || ||| | ||| |||||||||| || | || | | || | Sbjct 160837 GGTGATGAGTTCGAGGCCTTGTACGAGAAGTACGAGGCTGAGGGCCGCGGCCGTCAGAAG 160778 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 || | || | || | ||||| | || |||||| | |||| ||||||||||| | || Sbjct 160777 GT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACCGAGACTGGCAACCC 160719 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||| ||||| || ||| |||| ||||| || || ||||| | || || Sbjct 160718 CTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCAT 160659 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 || || ||||| || || ||||| |||| | | | | |||||| ||||| Sbjct 160658 TCGCAGCTCAAACCTGTGCACTGAAATTGTGGAGTACTCGGCCCCCGATGAGGTCGCTGT 160599 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 112496 || ||| | ||||| |||| || || | ||||| | | | || ||| | || Sbjct 160598 CTGCAACTTGGCATCTCTCGCGCTACCATCTTTCGTGGA-CTACA-ACGAAGGCGTATAC 160541 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 || | | || || ||||||||||| | ||| | ||||| |||| | || Sbjct 160540 GACTTCCAGAAGCTTCACGAAGTTACCCAGGTCGTCGTCCACAACCTGAACAAGATCATC 160481 Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 || || | ||||| || | || || || || ||| |||||||||| || Sbjct 160480 GACGTGAACTACTACCCTGTCCCGGAGGCACGCAACAGCAACATGCGACACCGTCCCATC 160421 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTG 112671 || || ||||| || ||||| || || ||| ||| ||| |||| || | Sbjct 160420 GGCCTAGGTGTTCAGGGTCTTGCTGACACCTTC-----TTGGCGCTTCGCATGCCTTTCG 160366 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | || || || | | | || || || || |||||||| || ||||| || | Sbjct 160365 AGTCGCCAGAGGCTAGACAGCTGAACAAGCAGATCTTCGAGACAATCTACCACGCTGC-C 160307 Query 112732 TTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 |||| ||| ||||| | || |||| || || ||||| || | || || ||| Sbjct 160306 TTGACAGCGTCCTCGGAAATTGCTAAGGTGGAGGGCCCATACTCCACTTACGAAGGCTCT 160247 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCA 112846 || | ||||| || | || || | || |||| |||| || | | || | ||| Sbjct 160246 CCTGTCTCACAGGGCATACTCCAGTACGACATGT-GGAATGTCACGCCGTCCGACCTT-- 160190 Query 112847 CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906 | |||||||| | || ||||| | |||||| |||| ||| | || |||||| | || Sbjct 160189 -TGGGACTGGGAAACGCTGAAGGACCAGATCAAGCAGAATGGTGTGCGAAACAGTTTGTT 160131 Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966 | |||| || ||||| || ||| ||| | || ||| |||| || || ||||| || || Sbjct 160130 GGTGGCCCCTATGCCCACTGCCAGTACCTCCCAGATCCTGGGCAACAACGAATGTTTCGA 160071 Query 112967 ACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 113025 || ||||| | |||||||| ||| | | ||| || || ||||| | | |||| Sbjct 160070 GCCTTACACCTCCAACATCTACTCT-CGCCGTGTCCTTGCTGGCGAGTTCCAGGTCGTCA 160012 Query 113026 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 113085 || || | | |||||| || || ||||| |||||| | | |||||| | | Sbjct 160011 ACCCTTGGCTGCTCAAGGACCTCGTGGATATGGGTCTTTGGTCCGATGGCATGAAGAACC 159952 Query 113086 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGA 113145 ||| | | || || |||||||| || ||| | |||| | || || ||| Sbjct 159951 GCATCATTGCCGAAGGCGGCTCCATTCAGAACATTCCCAACGTTCCCGCAGACATCAAGT 159892 Query 113146 AGTTGTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAG 113202 | ||| ||||| |||||||| || || | ||| | | ||||| || | Sbjct 159891 CTCTTTACAAGACAGTCTGGGAAATTTCTCAGCGGACG---GTCGTCCAGATGGCTGCCG 159835 Query 113203 ATCGTGGTCGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCA 113258 | ||||| ||| |||||||| | |||| ||| |||| | |||| | || || Sbjct 159834 ACCGTGG-CGCATTCATTGACC--AGTCTCAGTCGCTGAACATTCACATGCGTGAG-CCT 159779 Query 113259 ACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGG 113318 || ||| |||| || | |||||| | |||||||| |||||||| ||||| Sbjct 159778 ACCATGGGCAAGATCACCAGCATGCACTTCACTGGTTGGAAGCTCGGTCTCAAGACGGGC 159719 Query 113319 ATGTATTACCTCCGATCTAAGGC 113341 ||||| |||||||| || |||| Sbjct 159718 ATGTACTACCTCCGTACTCAGGC 159696 >seq1 Length=3626568 Score = 102 bits (112), Expect = 1e-16 Identities = 154/215 (72%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 102166 ||| || || |||| ||| || |||||||| |||||||| || || ||||| Sbjct 1873274 AGTCCCCTGCATTCGCCGGAAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTC 1873333 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 ||||||| |||| || |||| || || || ||||||||||||||| || Sbjct 1873334 CA---CCTTTGCCCAGCGCCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGG 1873390 Query 102227 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 ||||| ||| | || | ||||| |||||||| || || ||||| || || ||||| Sbjct 1873391 CGCCTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCT 1873449 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||| ||||| || |||||||| || ||| Sbjct 1873450 CCAACGAGCTCATCTCGCGCGACGAGGGCCTGCAC 1873484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741624072000