Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq15 190 2e-43 seq7 123 3e-23 >seq15 Length=644973 Score = 190 bits (210), Expect = 2e-43 Identities = 989/1564 (63%), Gaps = 47/1564 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| |||||||||||| || |||||| ||||| || || ||||| | || || Sbjct 159797 GTTCAGCGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCAGCCATCTGGACGACCGT 159856 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 | || |||||||||||| |||||||| | | |||||| || |||||| || Sbjct 159857 CCGCTGAGAAATTTCCCAGACTGTCTTGTAAAGAGACTTGATGTCTGCGGGAACGTTGGG 159916 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA----TGAGATCCTTCATCTCTTTCGACC 109675 ||||| ||||| ||||| |||||| || || | | |||||| | | |||| Sbjct 159917 AATGTTCTGAATGGAGCC----GCCTTCGGCAATGATGCGGTTCTTCATGCCATCGGACC 159972 Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAG 109735 | ||||| | | ||| || | | || |||||| || || || |||| Sbjct 159973 AAAGACCCATATCCACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAG 160032 Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795 |||| || || ||||||||| | ||||| || |||||||| || |||||||| | Sbjct 160033 CAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCA 160092 Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT 109855 |||| || | || || |||||||| || |||| | | ||||||||| | ||| | Sbjct 160093 GGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCAT 160152 Query 109856 TCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACC--ACTAAATTTAGTCTC 109913 || ||| | | | || || | ||||| || || | | || | | Sbjct 160153 TCTGCTTGATCTGGTCCTTCAGCGTTTCCCAGTCCCAAAGGTCGGACG-------GCGTG 160205 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 || || |||||| || || |||| |||| | ||||||| || | | || | Sbjct 160206 AC-ATTCCACATGTCGTACTGGAGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGA 160264 Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATACATAG 110032 ||| | ||||| |||| || | || || || || || || || || || || || | Sbjct 160265 GTATGGGCCCTCCACCTTAGCAATTTCCGAGGACGCTGTCAAG-GCAGCGTGGTAGATTG 160323 Query 110033 TCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA---- 110088 |||| || || || |||| | | || |||| | ||||| || | | | Sbjct 160324 TCTCGAAGATCTGCTTGTTCAGCTGTCTAGCCTCTGGCGACTCGAAAGGCATGCGAAGCG 160383 Query 110089 CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATG 110148 | ||||| || || |||||||||||||| || || ||||| || || |||| Sbjct 160384 CCAAGAAGGTG----TCAGCAAGACCCTGAACACCTAGGCCGATGGGACGGTGTCGCATG 160439 Query 110149 TTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTC 110208 || | || || || ||||| |||| |||||||| | || || || Sbjct 160440 TTGCTGTTGCGTGCCTCCGGGACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTG 160499 Query 110209 TTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTC-TCC 110265 | || || || | ||| || || || | | | ||| | || ||||| | Sbjct 160500 TGGACGACGACCTGGGTAACTTCGTGAAGCTTCTGGAAGTCGTATACGCCTTCGTTGTAG 160559 Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 | || | || || || || | ||| || | ||||| |||| ||| || | Sbjct 160560 TCCACGAAAGAT---GGTAGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGG 160616 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | ||| |||| |||||| || |||| ||| || || |||| || | ||||||| Sbjct 160617 GCCGAGTACTCCACAATTTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTC 160676 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 || || ||| |||||| |||||| ||||||||| | ||| | ||||| || ||| Sbjct 160677 TGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTC 160736 Query 110446 TGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGC-GAGAC 110503 || | | ||||||||| | ||| | | || | ||| ||| || | || | | | Sbjct 160737 TGAGCTTCGAGAATGGCATACCACAGCTTCTG-GGCCTTGACC-TTCTGACGGCCGCGGC 160794 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563 | || |||||||||| ||||||| |||| || || | ||||| ||||| | || | Sbjct 160795 CCTCAGCCTCGTACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGC 160854 Query 110564 CCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 | || || || || | ||| | ||| | || || ||| || | |||||||| Sbjct 160855 CAGGGCACTCGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGA 160914 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 | ||||| |||||||| | || ||| ||||| || ||| ||| || | ||| | Sbjct 160915 AAAGGTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTACCGT 160974 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| || || || | || || | | |||||||||||| || || | |||| | Sbjct 160975 GGTTCTTACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGG 161034 Query 110744 CGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | || || | | || || |||| | |||||| | || ||| |||| Sbjct 161035 CAAAGGCACC---AGGCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGA 161091 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | ||||||||| | || |||| ||| || || ||||| || || Sbjct 161092 AGACACGGAGCATAGGGACGATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGC 161151 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | |||||||||| ||||||| || ||| |||||||| ||| ||| || | Sbjct 161152 CAGTGGCACGAATACGATGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAG 161211 Query 110918 CACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| | | || ||| | || ||||| || || ||| |||| | | | || | Sbjct 161212 CACAAGTTTTCAGGGTATCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGA 161271 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 |||| || || | ||| | |||| || || || ||||| || || || | |||||| Sbjct 161272 AGCAGGATGAAAGCTGCGCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAG 161331 Query 111038 TGAA 111041 |||| Sbjct 161332 TGAA 161335 >seq7 Length=944196 Score = 123 bits (136), Expect = 3e-23 Identities = 223/321 (69%), Gaps = 9/321 (3%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| || ||||||||||| |||| |||||||| ||| || ||||| |||||| Sbjct 473266 GAAGCCATCCATTTCTGTCAGAATCTGGTTGAGCGTGGCCTCTCGCTCGTCGTTGCCCCC 473325 Query 11652 CATACCAC----CTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 | ||| | || ||| ||| | ||||| |||||||||||||| ||||||| || Sbjct 473326 GA-ACCGCTGTCCTTCCGCACGGGACCGACCGATGGCGTCAATCTCATCAATGAATATGA 473384 Query 11708 TACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACAC 11767 | || ||| || |||||| |||| || || || || || ||| || |||| Sbjct 473385 TGCAGGGTGTGTGTCTCCGTGCCGTGGCGAAGAGGTCTCGGACTCGGGACGCACCGACAC 473444 Query 11768 CTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGACTC 11825 | || |||||||| ||||| | | | || || ||||| ||| || || ||||| Sbjct 473445 CCACAAACATCTCCACGAATTCCGAACCGC-TCACGCTGAA-GAATGGTACTCCTGACTC 473502 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885 || ||| |||| ||||| | ||||||||||| ||||| | ||||| || | || Sbjct 473503 GCCCGCGGTGGCCTTCGCGAGCAACGTCTTACCCGTTCCAGGCGGCCCAGCAAGGATTGC 473562 Query 11886 GCCACGGGGGATCTTGGCACC 11906 ||||| || ||||||||||| Sbjct 473563 ACCACGCGGAATCTTGGCACC 473583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975263780000