Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15 235 6e-57 seq1 84.2 3e-11 >seq15 Length=644973 Score = 235 bits (260), Expect = 6e-57 Identities = 1170/1829 (64%), Gaps = 63/1829 (3%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 |||| || ||||| |||||||| || |||||||| || | ||||| | | ||| Sbjct 159696 GCCTGAGTACGGAGGTAGTACATGCCCGTCTTGAGACCGAGCTTCCAACCAGTGAAGTGC 159755 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATGAAAAGATTCATACTTTGACTCTG 105699 || | || |||| ||| || || || | |||| || |||| ||| ||| Sbjct 159756 ATGCTGGTGATCTTGCCCATGGTAGG-CTCACGCATGTGAATGTTCAGCGACTGAGACTG 159814 Query 105700 GTCAATGAA-GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTT 105755 ||||||||| ||| ||||| | || ||||| | | ||| | || || |||| Sbjct 159815 GTCAATGAATGCG-CCACGGTCGGCAGCCATCTGGACGAC---CGTCCGCTGAGAAATTT 159870 Query 105756 CCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTG 105815 |||| ||||| ||| ||| |||||| || | || | | | || || ||||| | Sbjct 159871 CCCAGACTGTCTTGTAAAGAGACTTGATGTCTGCGGGAACGTTGGGAATGTTCTGAATGG 159930 Query 105816 AACCCCCCGCCTT-GACCATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTC 105871 | || ||||| | | |||| | | |||||| | | |||||||||||| || | | Sbjct 159931 AGCC----GCCTTCGGCAATGATGCGGTTCTTCATGCCATCGGACCAAAGACCCATATCC 159986 Query 105872 TTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTC 105931 ||| || |||| || |||||| | | ||||| || || ||| | | Sbjct 159987 ACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCAAGGACACGGCG- 160045 Query 105932 AGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990 ||| |||||||| | ||||| || || || ||||| || || |||| ||| || | ||| Sbjct 160046 AGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGT 160105 Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050 ||| || ||||| || |||| ||| | |||||| || | ||| || | |||||| | Sbjct 160106 ACTGGCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGATCTG 160165 Query 106051 TTCCTTGAGAACATCCCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATATCAAA 106107 ||||| || |||||||| | || | | || | || |||| |||| || | Sbjct 160166 GTCCTTCAGCGTTTCCCAGTCCCAAAGGTCGGAC--GGCGTGACATTCC-ACATGTCGTA 160222 Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 || || | || || || ||||| || || | || || | || | | | Sbjct 160223 CTGGAGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTT 160282 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 ||| | ||| || ||| || || ||||| || || || || ||||| | || Sbjct 160283 AGCAATTTCCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTT 160342 Query 106228 CATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCG--GCACAAAATAAATACATCCGC 106284 || || | || || || || ||| || | ||| || | || | | || || Sbjct 160343 CAGCTGTCTAGCCTCTGGCGACTCGAAAGGCAT-GCGAAGCGCCAAGAAGGTG--TCAGC 160399 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 ||||| |||||||| | || || || | ||||||||| || || || || | Sbjct 160400 AAGACCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGCCTCCGG 160459 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 || || || | || ||| |||| ||| || || | | || | || || | Sbjct 160460 GACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGTAAC 160519 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGG 106458 ||| ||||| || | | || | || |||| ||| || | ||| Sbjct 160520 TTCGTGAAGCTTCTGGAAGTCGTATACGC------CTTCGTTGTAGTCCACGAAAGATGG 160573 Query 106459 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 106518 || |||| |||||||| ||||| ||||| |||||| | | |||||| | ||| Sbjct 160574 TAGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAAT 160633 Query 106519 TTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT 106578 ||| || |||| ||| || || ||| || || | ||||| ||||| ||||| ||| Sbjct 160634 TTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 160693 Query 106579 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGC 106638 ||| |||||||||||||||| |||| | || ||||| ||||| | | |||||| || Sbjct 160694 GCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGC 160753 Query 106639 CTTCCACA-CATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTT 106696 | ||||| | || | | || | | || || | | || ||||| ||||||||||| Sbjct 160754 ATACCACAGCTTCTGGGCCTTGACCTTCTGACG--GCCGCGGCCCTCAGCCTCGTACTTC 160811 Query 106697 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 106756 ||| | ||| || ||||| ||||| | |||| || || || || || || Sbjct 160812 TCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGG 160871 Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816 || | |||| ||| | || || ||| || ||||||||||||||||| |||||||| Sbjct 160872 CACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAA 160931 Query 106817 AGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 || | ||||| || | | ||| || ||| || | ||| ||||| || | || Sbjct 160932 AGAGCAAGGAAGAGGTCGCGAGCACGGA-TCTCCTCTTTACCGTGGTTCTTACGGAGATC 160990 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG----ATCCCT 106931 ||||||||| | | ||||| |||||| ||||| | |||| || | | | || Sbjct 160991 AAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCG 161050 Query 106932 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991 | | | ||| | |||| ||||| | ||| ||| ||| || || || ||||| || | Sbjct 161051 CTTGTTG-CCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGA 161109 Query 106992 TAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATC 107049 ||||||| || || || || || ||| |||||| | |||| | | | Sbjct 161110 CGATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAG--CCAGTGGCACGAATACG 161167 Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 |||||| | || || ||||| || ||| ||| ||||| ||||| | || || Sbjct 161168 ATGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGT 161227 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 | |||||||| | ||| || ||||| | ||| ||||||||| || | ||| Sbjct 161228 ATCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTG 161287 Query 107170 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--G 107227 || ||||||||||| ||||| |||||||| | || ||| |||| || ||| Sbjct 161288 CGCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAA-GTA-TTTGCCA 161345 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 ||||| || ||| ||||| | ||| || | | || || ||| |||| || Sbjct 161346 GACATGAGGTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAGATACCGACAGCA 161405 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAG 107347 |||||||||| ||||| || ||| | || | || ||||||||||| |||| ||| Sbjct 161406 ACACGCATAATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAG 161465 Query 107348 CTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | ||| | || |||| || ||||| Sbjct 161466 GACCGCTCCAAAGTCTTGAAGCCGAAGTA 161494 >seq1 Length=3626568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || || || || || || || |||||| ||||| ||||| || || Sbjct 1873484 GTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCC 1873425 Query 117345 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 |||||||||| ||| | || | ||| ||| | ||| ||||||||||||||| || Sbjct 1873424 GCGCTTCTTCAGCCAGAAGATGGACGC-GAAGGCGCCGCTGAAGAAGATACCCTCGACGG 1873366 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCA 117460 || || || | ||||||| ||| |||| | ||||| ||| || ||| |||| Sbjct 1873365 CGGCGAAGGCGATCAGGCGCTGGGCAAAGGTG---GACTTCCGGTCGGTAATCCACTTCA 1873309 Query 117461 TTGCCCATTTCGCCTTC 117477 ||||| | |||||| Sbjct 1873308 GGGCCCAATCGGCCTTC 1873292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980062524000