Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq15 352 5e-92 seq1 183 6e-41 >seq15 Length=644973 Score = 352 bits (390), Expect = 5e-92 Identities = 1053/1601 (66%), Gaps = 43/1601 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 |||||| |||||| |||||| ||||||| | | | ||| || ||||| | | || Sbjct 159797 GTTCAGCGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCAGCCATCTGGACGACCGT 159856 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | ||| || | ||||| || |||||| | | |||| ||| | || | | ||| Sbjct 159857 CCGCTGAGAAATTTCCCAGACTGTCTTGTAAAGAGACTTGATGTCTGCGGGAACGTTGGG 159916 Query 212816 GATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 |||||||| | || || ||| | ||| | | | | |||| | ||| ||| Sbjct 159917 AATGTTCTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTT---CATGCCATCGGACCA 159973 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 || ||| | | | ||| ||||| ||| ||||||||| | |||||| || || | Sbjct 159974 AAGACCCATATCCACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGC 160033 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 || || | | ||| | ||| || ||||| ||||||| | |||||||| ||||| Sbjct 160034 AAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAG 160093 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 ||||| | || ||||| |||||||| || ||||||| | |||||| | ||| || | Sbjct 160094 GATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATT 160153 Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112 || ||| || | ||| | |||||||||| | | ||| | | | Sbjct 160154 CTGCTTGATCTGGTCCTTCAGCGTTTCCCAGTCCCAAAGGTCGGACGG---------CGT 160204 Query 213113 CACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGA 213172 || ||||||||||| |||| | ||||| | || || ||| | ||||| ||| Sbjct 160205 GACATTCCACATGTCGTACTGGAGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGA 160264 Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232 ||| ||||| | | |||| || | || ||||||| || |||||||| |||||| || Sbjct 160265 GTATGGGCCCTCCACCTTAGCAATTTCCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGT 160324 Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCG 213292 || || |||| | |||| |||| | |||||||| ||| ||| ||||| | ||| Sbjct 160325 CTCGAAGATCTGCTTGTTCAGCTGTCTAGCCTCTGGCGACTCGAAAGGCATGCGAA-GCG 160383 Query 213293 TTG-GAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 ||| ||||| || ||||| || || | ||||||||| | ||||| || ||| Sbjct 160384 CCAAGAAGGTGTCAGCAAGACCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGC 160443 Query 213352 ACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGG 213410 ||| | || |||| | ||||| |||| ||||||||||||||| |||||| || Sbjct 160444 TGTTGCGTGC-CTCCGGGACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGG 160502 Query 213411 GTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC 213470 | | || | ||| || | | || | || | | | | ||| | || | | Sbjct 160503 ACGACGACCTGGGTAACTTCGTGAAGCTTCTGGAAGTCGTATACGCCTTCGTTGTAGTCC 160562 Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 || || || || |||| |||| |||||| || || ||||| | | | | | | Sbjct 160563 ACGAAAGATGGTAGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAG 160622 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590 ||||||| || || ||||||||||| || || |||||||| ||||||| ||| || Sbjct 160623 TACTCCACAATTTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGG-TT 160681 Query 213591 GACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649 | ||||| | |||| |||||||||||||||| ||||| || ||||| ||| | Sbjct 160682 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGC 160741 Query 213650 CACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGC 213707 | || | |||| ||| || | | |||||||| || ||||| || ||| | Sbjct 160742 TTCGAGAA--TGGCATACCACAGCTTCTGGGCCTTGA----CCTTCTGACGGCCGCGGCC 160795 Query 213708 GT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCC 213766 | ||||||||||| ||||| | | | ||| || | || |||| | | || || Sbjct 160796 CTCAGCCTCGTACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCC 160855 Query 213767 CGGACA-GGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATG 213824 || || | |||| |||||||| |||| || ||| || |||| ||| | || |||| Sbjct 160856 AGGGCACTCGTTCGGG-CACATGAGAGTCCACTCGCCGTTCTTCTC-GACACGCTTCATG 160913 Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884 || ||||| || | ||| || || ||| ||||| | | | |||| || || Sbjct 160914 AAAAGGTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTACCG 160973 Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944 ||| || || ||||| || || || || | |||| |||||||||||||| ||||||| Sbjct 160974 TGGTTCTTACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATG 161033 Query 213945 GCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001 |||||||| || |||| | ||||| ||||| || || || || |||||||| Sbjct 161034 GCAAAGGCACCAGGCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGAAG 161093 Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCG 214061 | || || | || || | || |||||| |||||| || || || || |||||||| Sbjct 161094 ACACGGAGCATAGGGACGATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCCA 161153 Query 214062 GAGGCCC--TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGG 214119 | ||| | | | || || | | || || |||||||| |||||||||||| | Sbjct 161154 GTGGCACGAATACGATGGATATTCAAA--CCGATACCACCGGCCATCTTGGAGATCATAG 161211 Query 214120 CGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGA 214179 | || ||| || || ||| || | ||||| ||||| | | | | | || Sbjct 161212 CACAAGTTTTCAGGGTATCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGA 161271 Query 214180 AGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGG 214238 ||||| || |||| | ||||| | | |||| ||||||||| || ||| |||||| Sbjct 161272 AGCAGGATGAAAGCT-GCGCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGA 161330 Query 214239 ATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279 | | | ||| ||| | ||| |||||||||| | ||| Sbjct 161331 GTGAAGTATTTGCCAGACATGAGGTTGTAGGTCTCAATGAC 161371 >seq1 Length=3626568 Score = 183 bits (202), Expect = 6e-41 Identities = 346/503 (69%), Gaps = 11/503 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 1873787 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTC 1873728 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | | || ||| |||| ||| | | |||| Sbjct 1873727 CATGAAGTCGAAGGGGTTGGTGGAGCGGTAGACCT-TGTCGTTGCCGAGGGCGACGAGCA 1873669 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| || ||||||||| | |||| Sbjct 1873668 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGGG 1873609 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| |||| ||||| ||||||| ||| |||| |||||| || | | || Sbjct 1873608 CGCAGGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATCTCCACGGCATCGGTGATGACCT 1873549 Query 48078 GCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || ||| || || || | || || ||||||| | | |||| ||||| Sbjct 1873548 TCTGGACGATCTCCTTGCTCGGGCGGTTCTT---CAGGTGCGAGA---ACAGCAGGCAGG 1873495 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||||| ||| ||||| || ||||||| ||||||||||| || || | Sbjct 1873494 CGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGG 1873435 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || |||||||| || | |||||| | ||| ||||||||| | Sbjct 1873434 GCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAAGGCGCCGCTGAAGAAGATAC 1873375 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || ||||| ||| | || | || | || | | ||| ||| | |||| Sbjct 1873374 CCTCGACGGCGGCGAAGGCGATCAGGCGCTGGGCAAAGGTGGACTTCCGGTCGGTAATCC 1873315 Query 48315 AGGAAAGCGCCCAGTCTGCCTTC 48337 | || ||||| || |||||| Sbjct 1873314 ACTTCAGGGCCCAATCGGCCTTC 1873292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531635584000