Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15 208 9e-49 seq1 84.2 3e-11 >seq15 Length=644973 Score = 208 bits (230), Expect = 9e-49 Identities = 1048/1647 (64%), Gaps = 41/1647 (2%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 ||||| || |||| || | ||| | ||| |||| ||||||||||| || | Sbjct 161494 TACTTCGGCTTCAAGACTTTGGAGCGGTCCTACCTTCTGAAGCTCGATGGCAAGATCGTC 161435 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || | || ||| ||||| | ||||| || || |||| ||| || || | | || Sbjct 161434 GAGAGACCGCAGCACATGATTATGCGTGTTGCTGTCGGTATCTGGGGTGACAATGTAGAG 161375 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 75323 ||| | ||||| ||| || ||||| ||| || |||| ||| || | |||| Sbjct 161374 AAGGTCATTGAGACCTACAACCTCATGTCTGGCAAA-TAC-TTCACTCATGCCTCCCCAA 161317 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 |||| ||||| ||||||||||| ||||| | || ||||||||| ||| | | Sbjct 161316 CCCTTTTCAACGCTGGTACACCTCAGGCGCAGCTTTCATCCTGCTTCCTTGTCGATATGA 161257 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||| || ||| | |||||||| | || || | ||||| ||||| ||| Sbjct 161256 AGGATGATAGCATCGAGGGTATCTACGATACCCTGAAAACTTGTGCTATGATCTCCAAGA 161197 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGG 75502 ||| || ||||| || || | |||||| | | | |||| | |||||| ||| Sbjct 161196 TGGCCGGTGGTATCGGTTTGAATATCCATCGTATTCGTGCCACTGG--CTCGTACATCGC 161139 Query 75503 GGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 || || || || || ||||||| | || ||||| || || || ||| ||| || Sbjct 161138 CGGTACTAACGGAACGTCCAATGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACCGC 161079 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAAC 75617 | | ||||| |||| | | ||| | || ||| || | || |||||||||| | Sbjct 161078 GAGATATGTTGATCAGG-GTGGCAACAAGCGGCCTGGTGCCTTTGCCATCTACTTGGAGC 161020 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| | ||| | | ||||||||||| | || ||||| ||| | || ||| Sbjct 161019 CGTGGCACTCGGATGTTTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGA 160960 Query 75678 CTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || ||| | | || ||||| | || |||||||| ||||||||||||||||| || Sbjct 160959 -TCCGTGCTCGCGACCTCTTCCTTGCTCTTTGGATTCCCGACCTTTTCATGAAGCGTGTC 160901 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 ||| || || | ||| |||| | || || || || || || || |||| | Sbjct 160900 GAGAAGAACGGCGAGTGGACTCTCATGTGCCCGAACGAGTGCCCTGGCCTAGCCGATGTC 160841 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 ||||| ||||| || ||| | ||| ||||| || | ||||| | | | | | Sbjct 160840 TACGGTGATGAGTTCGAGGCCTTGTACGAGAAGTACGAGGCTGAGGGCCGCGGCCGTCAG 160781 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 | || | || | | || | | ||| | || |||||| || | ||||| |||||||| | Sbjct 160780 AAGGT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACCGAGACTGGCAA 160722 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| ||||||||| || ||| ||||| ||||| ||||| | || || Sbjct 160721 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 160662 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 || |||||||| || ||||| |||||| | |||||| | | |||||| || Sbjct 160661 CATTCGCAGCTCAAACCTGTGCACTGAAATTGTGGAGTACTCGGCCCCCGATGAGGTCGC 160602 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCG 76089 ||| ||||| |||||||| |||| || ||| | || ||| |||| | Sbjct 160601 TGTCTGCAACTTGGCATCTCTCGCGCTACCATCTTTCGTGGACTACAACGAAG------G 160548 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | | || | | || ||||| ||| | || || | || | | || || ||| Sbjct 160547 CGTATACGACTTCCAGAAGCTTCACGAAGTTACCCAGGTCGTCGTCCACAACCTGAACAA 160488 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||| ||| || | || || || | || || || || ||||||||| | Sbjct 160487 GATCATCGACGTGAACTACTACCCTGTCCCGGAGGCACGCAACAGCAACATGCGACACCG 160428 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGC--CGCTACGCA 76267 || || || | |||||||| ||||| || || | | || | || ||| | || Sbjct 160427 TCCCATCGGCCTAGGTGTTCAGGGTCTTGCTGA--CACCTTCTTGGCGCTTCGC-ATGCC 160371 Query 76268 TTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 ||| || || || || | || |||| | ||||| || || || || ||||| Sbjct 160370 TTTCGAGTCGCCAGAGGCTAGACAGCTGAACAAGCAGATCTTCGAGACAATCTACCACGC 160311 Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 || || ||| | ||| | ||| | | | || | || || | || || Sbjct 160310 TGCCTTGACAGCGTCCTCGGAAATTGCTAAGGTGGAGGGCCCATACTCCACTTACGAAGG 160251 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAA 76446 ||||| | || || || | || |||| || |||| |||| || | || | | | Sbjct 160250 CTCTCCTGTCTCACAGGGCATACTCCAGTACGACATGT-GGAATGTCACGCC--GTCCGA 160194 Query 76447 C---TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 76503 | | |||||||| || ||||| | |||||| |||| ||| | || |||||| | Sbjct 160193 CCTTTGGGACTGGGAAACGCTGAAGGACCAGATCAAGCAGAATGGTGTGCGAAACAGTTT 160134 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 ||| |||| || ||||| || ||| ||| | || ||| |||| || || ||||| || Sbjct 160133 GTTGGTGGCCCCTATGCCCACTGCCAGTACCTCCCAGATCCTGGGCAACAACGAATGTTT 160074 Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGT 76623 || || ||||| | ||||||||| | | ||| || || ||||| | || Sbjct 160073 CGAGCCTTACACCTCCAACATCTACTCTCGCCGTGTCCTTGCTGGCGAGTTCCAGGTCGT 160014 Query 76624 CAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA 76683 |||| || |||| |||||| | | || ||||| |||||| | | |||||| | Sbjct 160013 CAACCCTTGGCTGCTCAAGGACCTCGTGGATATGGGTCTTTGGTCCGATGGCATGAAGAA 159954 Query 76684 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAA 76743 | ||| | | || || |||||||| || || | | | || | || ||||| Sbjct 159953 CCGCATCATTGCCGAAGGCGGCTCCATTCAGAACATTCCCAACGTTCCCGCAGACATCAA 159894 Query 76744 GAATCTCTACCGCACAGTGTGGGAAAT 76770 | ||| ||| ||||| |||||||| Sbjct 159893 GTCTCTTTACAAGACAGTCTGGGAAAT 159867 >seq1 Length=3626568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 65025 GAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||| | ||||| |||| ||| || ||| ||||| | |||| ||| |||| Sbjct 1873292 GAAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTC---CACCTTTGCCCAGCG 1873348 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 ||| | || || || || ||||||||||||||| ||| | ||| ||| | || | Sbjct 1873349 CCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTC-GCGTCCATCT 1873407 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| |||||||||| || || ||||| ||||| |||||| || || || || || | Sbjct 1873408 TCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGC 1873467 Query 65201 GAGATGAGGGTCTCCAC 65217 | || ||||| || ||| Sbjct 1873468 GCGACGAGGGCCTGCAC 1873484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568854288000