Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq14 495 5e-135 seq21 187 3e-42 seq6 185 1e-41 seq72 149 8e-31 seq29 149 8e-31 seq47 147 3e-30 >seq14 Length=2677235 Score = 495 bits (548), Expect = 5e-135 Identities = 1031/1524 (68%), Gaps = 16/1524 (1%) Strand=Plus/Minus Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 |||||||| | || ||||| || ||||| || || ||||||| ||||||||| || || Sbjct 2317459 GAGATTATTGCCAACGACCAGGGCAACCGAACGACGCCATCGTTCGTTGCCTTCACGGAC 2317400 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | ||| || || | || |||||||| || || ||| || |||||||| || || Sbjct 2317399 ACTGAGCGCCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACA 2317340 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| ||||| |||||||| ||||| |||||||| || || | || || | ||| Sbjct 2317339 GTCTTCGACGCCAAGCGTCTGATTGGCCGCAAGTTCTCCGACGCTGAGGTTCAGGCCGAC 2317280 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 || ||| ||| | | | ||| | || | | | | || ||||| || | | || Sbjct 2317279 ATGAAGCACTTCCCCTTT-AAGATCATCGAGAAGAG-CGGA-AAGCCCATCGTCCAGGTC 2317223 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661 || | | |||||| |||| || || ||||||| || || ||||||||||| |||| Sbjct 2317222 GAGTACAAGGGTGAGCAGAAGCAGTTCACTCCCGAGGAGATCTCGTCTATGGTCTTGACC 2317163 Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||| |||||| || || |||| | | ||| | || | | || || | || Sbjct 2317162 AAGATGAGGGAGACGGCTGAGTCTTACCTTGGTGGTAACGTCACCAACGCTGTCATTACC 2317103 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| || | | ||||| Sbjct 2317102 GTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCCGGTCTCATTGCT 2317043 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| ||| |||| |||||||| || || || || || || || || ||||| Sbjct 2317042 GGTCTGAACGTTCTCCGAATCATCAATGAGCCCACGGCTGCCGCCATCGCCTACGGTCTT 2316983 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||||| || | || ||||| | || || || || ||||||||||| || Sbjct 2316982 GACAAGAAGTCCGAGGGCGAGCGCAATGTCCTCATTTTCGACCTTGGTGGTGGTACCTTC 2316923 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | || || | ||||| ||||| || ||| | || |||||||| Sbjct 2316922 GATGTCTCCCTTCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCTGGTGAC 2316863 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTT 196020 ||||| | |||||||| || ||||| ||||| || || || ||| |||| || Sbjct 2316862 ACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC-AATGAATT 2316804 Query 196021 CCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGAC 196080 | || ||| | ||||| || | || || || | ||||| || || || | || Sbjct 2316803 CAAGCGCAAGCACAAGAAGGACCTCTCGTCCAACGCTCGTGCTCTCCGACGTCTCCGCAC 2316744 Query 196081 TGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGA 196140 || ||||| |||||||| || ||||| || ||| | || || || | ||||||| || Sbjct 2316743 CGCTTGTGAGCGTGCCAAGCGTACTCTGTCGTCTTCTGCCCAGACCTCGATTGAGATCGA 2316684 Query 196141 TTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTT 196200 || |||| || || ||||||||||| || | |||||||| || | || || ||| | Sbjct 2316683 CTCCCTGTTCGAGGGTATTGACTTCTACACCTCCATTACCCGAGCCAGATTCGAGGAGCT 2316624 Query 196201 AAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG-TGACGCAA 196259 | || | || | || | || || || | || ||| | || || | Sbjct 2316623 CTGCCAGGACCTCTTCCGATCCACCATCCAGCCCGTCGACCGTGT-CTTGGCCGATGCTA 2316565 Query 196260 AGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGA 196319 |||| || |||||| |||| | || || || || || || || || || ||||| || Sbjct 2316564 AGATCGACAAGTCTCAGGTCCACGAGATCGTTCTCGTCGGTGGCTCCACGCGTATCCCCC 2316505 Query 196320 AGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACC 196379 | || || | || | || |||||| || || ||||| | ||||||| Sbjct 2316504 GTGTCCAGAAGCTCATTGCCGACTACTTCAACGGCAAGGAGCCCAACAAGTCCATCAACC 2316445 Query 196380 CGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACA 196439 | ||||| || ||||| || ||||| ||||| ||||||||||| || || || |||| Sbjct 2316444 CCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCTATCCTGTC---TGGCGACA 2316388 Query 196440 ATA--ATAACGTCC----AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 || | |||| | || ||||||| || || || || || | ||||| ||| Sbjct 2316387 CTAGCTCCAAGTCCACCAACGAGATTCTGCTTCTGGACGTCGCCCCGCTGTCCCTCGGTA 2316328 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || |||||| | ||||| || |||| | ||||| || || || || | Sbjct 2316327 TCGAGACCGCCGGTGGTATGATGACCAAGCTTATCCCCCGCAACACGACCATCCCCACCA 2316268 Query 196554 AGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTAT 196613 ||||| | ||||| || || | ||||| || || || ||||| | || || || | Sbjct 2316267 AGAAGTCGGAGGTCTTCTCCACCTTCTCCGACAACCAGCCTGGTGTGCTCATCCAGGTCT 2316208 Query 196614 ATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGG 196673 | || || || ||| || | ||||| ||| | || || || | ||||| | || | Sbjct 2316207 ACGAGGGTGAGCGCCAGCGCACCAAGGACAACAACCTGCTGGGCAAGTTCGAGCTTACCG 2316148 Query 196674 GGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAA 196733 | ||||| | || ||| | ||||| || ||||| | || ||||||| | || || | Sbjct 2316147 GCATTCCGCCCGCGCCCCGTGGTGTCCCTCAGATCGAGGTCACCTTCGATGTTGATGCCA 2316088 Query 196734 ATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGA 196793 | || || | |||||| | || | || |||| ||||||| || | |||||||| | Sbjct 2316087 ACGGTATCATGAACGTCTCTGCCGTTGAGAAGGGCACTGGCAAGTCCAACAAGATTGTCA 2316028 Query 196794 TTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGG 196853 | ||||| |||||||| || || || |||||||| || || || ||| || || || | Sbjct 2316027 TCACCAACGACAAGGGCCGTCTGTCCAAGGAGGAGATCGAGCGCATGCTTGCTGAGGCCG 2315968 Query 196854 AAAAGTACAGGGAAGAAGACGAGG 196877 | ||||||| ||| || || |||| Sbjct 2315967 AGAAGTACAAGGAGGAGGATGAGG 2315944 >seq21 Length=521316 Score = 187 bits (206), Expect = 3e-42 Identities = 171/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || ||||| || ||||| || |||||||||||||||||||| || ||||| || || Sbjct 163587 GTCAAGACCCTGACCGGAAAGACGATCACCCTCGAGGTTGAGTCCTCCGACACCATTGAC 163528 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||| |||| | |||||||| || ||||| |||||||| ||||| ||||| ||| | || Sbjct 163527 AACGTCAAGTCAAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGATTGATC 163468 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || |||||||| ||||| || ||||| || ||||| | || |||||| |||| |||||| Sbjct 163467 TTCGCTGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCCGACTACAACATTCAGAAGGAG 163408 Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || ||||| ||||| | || || |||||| Sbjct 163407 TCCACCCTCCACCTCGTTCTTCGTCTCCGCGGTGGT 163372 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || ||||| || || || ||||| || |||||||||| Sbjct 163148 GTGGTATGCAGATCTTCGTCAAGACTCTTACGGGGAAGACCATCACGCTGGAGGTTGAGT 163089 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || | || ||||||||| || |||||||||||||| || | Sbjct 163088 CATCGGACACCATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCCCCGG 163029 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || || ||||| |||||||| ||||| || || || ||||| | || | Sbjct 163028 ATCAGCAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGTCGTACGTTGAGCGACT 162969 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| || || ||| | || || | || || ||||| Sbjct 162968 ACAACATCCAGAAGGAGAGCACCCTCCACTTGGTCCTGCGTCTCCGTGGTGG 162917 >seq6 Length=957631 Score = 185 bits (204), Expect = 1e-41 Identities = 479/722 (66%), Gaps = 15/722 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || ||||| || |||||||| | ||| || Sbjct 651551 ACTGTCCCCGCCTACTTCAACGACAACCAGCGCCAGGCTACCAAGGACGCCGGTGCCATC 651492 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | ||||| ||| || | ||||| || || || || || ||||| || || || || Sbjct 651491 TCCGGTCTCAACGTCCTCCGTATTATTAACGAGCCTACTGCCGCTGCCATCGCCTACGGC 651432 Query 195839 CTGGACAAGAACAAGGACGAAGATAAA----AATGTATTGATCTTTGATCTCGGTGGTGG 195894 |||| | |||| || |||| | ||||| |||| | ||||| |||||||| Sbjct 651431 CTGGGTTCCAGCAAG-ACTAAGAAGGAGCGCAATGTCCTGATTTACGATCTTGGTGGTGG 651373 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || ||||| || || || || || | ||||| | ||| || | |||||||| Sbjct 651372 TACTTTCGATGTGTCCCTCCTTAACATCCAGGGTGGCGTGTTCACCGTCAGAGCTACTGC 651313 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014 ||||| || ||||| ||||| | || ||||| | ||||| || | | Sbjct 651312 CGGTGACACCCATCTTGGTGGCCAGGACTTCGACACCAACCTTCTGGAGCACTGCAAGAA 651253 Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCT 196074 ||||||| || |||| ||||| || ||||| || | || | || ||||| | || Sbjct 651252 GGAGTTCCAGCGTAAGACCAAGAAGGACATTTCCGGCGACCCGCGAGCCCTTCGAAGACT 651193 Query 196075 TAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTT 196132 ||||||| || || |||||||| | || || || | ||| || || || | | Sbjct 651192 CCGGACTGCTTGCGAGCGTGCCAAGAGGACCCTGTC--CAACGGTGCCCAGACCACCATC 651135 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC-TATTACCCGTGCACGTTT 196191 ||||| || ||| |||| ||||| |||||||| | | | || |||||||| ||||| Sbjct 651134 GAGATCGACTCGCTGTTCGACGGTGATGACTTCT-TCCTCCAGATCACCCGTGCCCGTTT 651076 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 |||||| | ||| | | || | || | | |||| || |||| || || || Sbjct 651075 TGAAGACCTGAACGCGAAGGCCTTCAACGGCA--CTCTGGAGCCGGTTGCCCAGGTCCTC 651018 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||||| | || ||| | ||||| || || || ||||| || || || ||| Sbjct 651017 AAGGACGCCGCCGTCGAGAAGAGCACCGTTGACGAGATCGTTCTTGTCGGTGGTTCCACC 650958 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 |||||||| ||||| || || |||| ||| ||| || ||| | | | || Sbjct 650957 CGTATTCCCAAGATCCAGAAGCTGCTCAGCGACTTTTTCGATGGTAAGAAGCTCGAGAAG 650898 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | || ||||| || || || ||||| || ||||| ||||||||||||| ||| || || Sbjct 650897 AGCATTAACCCCGACGAGGCCGTTGCCTACGGTGCCGCCGTTCAGGCTGGTATCCTTTCC 650838 Query 196430 GG 196431 || Sbjct 650837 GG 650836 >seq72 Length=40277 Score = 149 bits (164), Expect = 8e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || ||||||||||||||||| |||||| Sbjct 18879 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC 18820 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||| || || ||||| ||||| || || || ||| Sbjct 18819 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 18760 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || || || || |||||| | || |||||| Sbjct 18759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCTCGGACTACAAC 18700 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || |||||| || || ||||| || || | || || || || || Sbjct 18699 ATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGCGGAGGCGC 18650 >seq29 Length=442204 Score = 149 bits (164), Expect = 8e-31 Identities = 230/326 (71%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||| ||| || || | | |||| || | || | |||| ||||| || Sbjct 420581 AAGATGAAGGAGGTTGCCGAGTCCTACCTGGGCAAGAAGGTCACCCATGCCGTTGTTACC 420522 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || |||| || || |||||||||| | ||||| Sbjct 420521 GTCCCTGCCTACTTCAACGACAACCAGAGACAAGCCACCAAGGACGCTGGCACCATTGCC 420462 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || ||||| |||| || || || || ||||| || || || || | Sbjct 420461 GGTCTGAACGTGCTGCGAATTGTCAACGAGCCTACTGCCGCTGCTATCGCCTACGGATTA 420402 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||| | ||||| | | | | ||| ||| || || ||||||||||| || Sbjct 420401 GACAAGTCCGGCGACGAGCGTCACATCG--TTG-TCTACGACCTTGGTGGTGGTACTTTC 420345 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || || || |||| |||| | ||||| || |||||| |||||||| Sbjct 420344 GATGTTTCCCTCCTGTCCATCGAAGATGGTGTTTTCGAGGTCTTGGCTACCGCTGGTGAC 420285 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| |||||||| |||||||| Sbjct 420284 ACCCATCTCGGTGGTGAGGATTTCGA 420259 >seq47 Length=1462733 Score = 147 bits (162), Expect = 3e-30 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || |||||||||||||| |||||||| ||||| ||| Sbjct 1313607 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 1313666 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| | |||||||| || ||||| ||||| || || || ||||| || || Sbjct 1313667 GACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTG 1313726 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 ||||| || || || ||||| || ||||| || |||||| | || |||||| | || ||| Sbjct 1313727 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 1313786 Query 172051 G 172051 | Sbjct 1313787 G 1313787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861577672000