Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15 161 3e-34 seq6 116 1e-20 >seq15 Length=644973 Score = 161 bits (178), Expect = 3e-34 Identities = 567/878 (65%), Gaps = 13/878 (1%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || ||||| ||| ||||||||| || || |||||||| | ||||||||||| Sbjct 160622 GTACTCCACAATTTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTT 160681 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| || ||||||||| || ||| | ||| | || ||||| |||| || Sbjct 160682 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGC 160741 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | |||| || | | || | | ||| || | Sbjct 160742 TTCGAGAATGGCATACCACAGCTTCTGGGCCTTGACCTTCTGACGGCCGCGGCCCTCAGC 160801 Query 155810 CTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 ||| || ||| |||| | | | || |||||||| ||| || |||||||| Sbjct 160802 CTCGTACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCA 160861 Query 155870 CTTATCGGGGCAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATAC 155926 || | ||||| | || | ||| || || ||| |||||| ||| || | Sbjct 160862 CTCGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGA---CACGCTTCATGAAAAG 160918 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 || ||||| |||| ||| ||||| | || |||||| | ||||| || Sbjct 160919 GTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTT 160978 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||| || || || | ||| || || ||| | || ||||||| || || ||||| Sbjct 160979 CTTACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAA 161038 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || |||| ||||||||||| ||||| | || || || |||||||||| Sbjct 161039 GGCACCAGGCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACG 161098 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 |||||||| | ||||||||||| || || || || ||| || | ||| |||| | Sbjct 161099 GAGCATAGGGACGATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGC 161158 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATT 156222 |||| | ||| |||| | || |||||||| | |||| || || || ||| || Sbjct 161159 ACGAATACGATGGATATTCAAACCGATACCACC-GGCCATCTTGGAGATCATAGCACAAG 161217 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 || | |||| | | ||||| || || |||||| | ||| | || |||| | Sbjct 161218 TTTTCAGGGTATCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGG 161277 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 | | || | | ||||| ||||||||||| || || || | |||||| | || | Sbjct 161278 ATGAAAGCTGCGCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGT 161337 Query 156343 ACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATT-AGACCCGTGAATA 156401 | || |||||| | ||| ||||| | | |||||| | ||| |||| | ||| Sbjct 161338 ATTTGCCAGACATGAGGTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAG-ATA 161396 Query 156402 CAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGC 156461 | || || || | ||| ||| ||||| || | ||| || ||| ||||| | | Sbjct 161397 CCGACAGCAACACGCATAATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTC 161456 Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 |||||||| | || |||| ||| || || ||||| || Sbjct 161457 AGAAGGTAGGACCGCTCCAAAGTCTTGAAGCCGAAGTA 161494 >seq6 Length=957631 Score = 116 bits (128), Expect = 1e-20 Identities = 183/257 (71%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 |||||| ||||||||||| || | ||| || || || ||||| || ||||| |||| Sbjct 697749 ACGACGTTGAATATAACCGGTCTCGGCTGTCTTGACGGCGGTATCGATGAGACCCTCACG 697808 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCG--GTCGT-AGCCCCCCAATAAAGGAGCT 302708 |||| |||| || |||||| | | ||||| | || || || | | | | ||| | Sbjct 697809 ACCAGCCATGGCGTGGAAGTAGAA---TTCCGAAGGGGTCAGTCCGCGGAGATAAGAGTT 697865 Query 302709 CTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCT 302768 ||||||||||||||| || ||||| || | ||| |||||| || || |||| || | Sbjct 697866 CTCAACGAAACCACGAGCTTCGGGTGAGTAATCGTCCTTGGTGAAATGAGGCAAAGTTCG 697925 Query 302769 GTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC--CAGGCACGAA 302826 || | | | || | || |||||||| || || ||| |||||||||| || | || Sbjct 697926 GTATTTAAACCCAAAGGGTATACGCTTGCCCTCGACGATCTGCTGTCCTACAAGGGCG-- 697983 Query 302827 ATCATCTGCGAAATATT 302843 ||||||||||||| || Sbjct 697984 GTCATCTGCGAAATGTT 698000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815714233700