Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15 154 1e-32 seq72 107 2e-18 seq21 98.7 9e-16 >seq15 Length=644973 Score = 154 bits (170), Expect = 1e-32 Identities = 918/1452 (63%), Gaps = 52/1452 (4%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAAT--ATGTC-GCGGTATTGTTGC-AATATT 138413 || ||||| || |||||||| ||| || | ||||| |||| | |||| ||| || Sbjct 159867 ATTTCCCAGACTGTCTTGTAAAGA----GACTTGATGTCTGCGGGAACGTTGGGAATGTT 159922 Query 138414 TTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAA 138473 |||||| ||| | ||||||||||| || ||||| ||||| | ||| || Sbjct 159923 CTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTTCATGCCATCGGACCAAAGACCCAT 159982 Query 138474 CTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCG 138533 | | | ||| || | ||| | ||| | |||||| || || || || | || || Sbjct 159983 ATCCACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCAAGGACACG 160042 Query 138534 ACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGC 138593 ||| ||| |||||| |||| ||||||| || |||||||||| ||||| ||||| | Sbjct 160043 GCGAGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGA 160102 Query 138594 CGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGAT 138653 || | || || ||||| |||||||| | | || || | ||| | ||||||| Sbjct 160103 GGTACTGGCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGAT 160162 Query 138654 TCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTA 138713 | ||||| |||| ||||||||| | ||| || | |||||||| ||||| Sbjct 160163 CTGGTCCTTCAGCGTTTCCCAGTCCCAAAGGTCGGACGGCGTGACATTCCACATGTCGTA 160222 Query 138714 CTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTG 138773 ||| | || ||| | ||| ||||||||| | |||| || | | | Sbjct 160223 CTGGAGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTT 160282 Query 138774 CGCCAACTCGTTGCTCGC-CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832 || | || | ||| || || ||| | | ||| || || ||| ||||||| | Sbjct 160283 AGCAATTTCCGAGGACGCTGTCAAG-GCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGT 160341 Query 138833 TGAGCAATCGGGCCTC-GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCC 138891 | ||| || ||||| |||| |||| | |||||||| ||| | ||| | ||| || Sbjct 160342 TCAGCTGTCTAGCCTCTGGCG-ACTCGAAAGGCATGCGAAGCGCCAAGAAGGTGTCAGCA 160400 Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC 138950 || || || || || | |||| || || || |||| || ||| ||||| || || Sbjct 160401 AGACCCTGAACACCTAGGCCGATGGGACGGTGTCGCA----TGTTGCTGTTGCGTGCCTC 160456 Query 138951 ---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007 || ||| || ||||| || |||||||| ||||| | || | ||||| |||| || Sbjct 160457 CGGGACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGT 160516 Query 139008 CGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAA 139066 | | | || | | | || |||||| ||| |||||| ||| ||| || Sbjct 160517 -AACTTCGTGAAGCTTCTGGAAGTCGTATACGCCTTCGTTGTAGTCCACG--------AA 160567 Query 139067 ATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATT 139126 | || | | | | || || | |||||| || || || || |||||| | ||| | Sbjct 160568 AGATGGTAGCGC-GAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACT 160626 Query 139127 CGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTT 139186 | |||||||| | |||| || | || || || | || | || ||||| | Sbjct 160627 CCACAATTTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCT 160686 Query 139187 TTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTA 139246 | ||||| || ||| ||||| ||||| | || ||||||| || || | || | Sbjct 160687 TGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGA 160746 Query 139247 TAATGAATTTGAACAAGTCCCTAG-CTTG--TATTTGACGCACGTAAAGTTCGTCGCGCT 139303 |||| | ||| | | | |||| | ||||| || | | || || Sbjct 160747 GAATGGCATACCACAGCTTCTGGGCCTTGACCTTCTGACGGCCG---CGGCCCTCAGCCT 160803 Query 139304 CGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACT 139363 ||||||| ||||| | | ||||| ||||||||| | || | || | | |||| Sbjct 160804 CGTACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACT 160863 Query 139364 TGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423 || || |||||||| | ||| |||||||| || ||| ||| ||||||| || || | Sbjct 160864 CGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGG 160923 Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTT 139483 ||||||| | ||| | | | ||||| || | || || ||| ||| || Sbjct 160924 GAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTT--CTT 160981 Query 139484 TC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541 | | | |||||| || ||||| || | |||||| || |||| |||||||| | || Sbjct 160982 ACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGC 161041 Query 139542 GCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598 || ||| |||||||| ||||| || | || | | || ||||| || || | Sbjct 161042 ACCAGGCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAG 161101 Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAG 139654 ||| || | | ||| | | |||||||| || || | | | | | | || | Sbjct 161102 CATAGGGACGATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCCAGT----GG 161157 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAAT 139714 | || | ||| | ||| | ||||| || ||| | | ||||| || | | | ||| Sbjct 161158 CACGAATACGATGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAG 161217 Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 | || ||||| ||||| ||||| || |||| ||| ||| || ||||| | Sbjct 161218 TTTTCAGGGTATCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGG 161277 Query 139775 ACGAAAGTTGCG 139786 | ||||| |||| Sbjct 161278 ATGAAAGCTGCG 161289 >seq72 Length=40277 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || | | | Sbjct 18879 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC 18820 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 18819 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 18760 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| || ||||| ||||| | | | | || || || ||| Sbjct 18759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCTCGGACTACAAC 18700 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || ||||| || || ||| |||| |||| |||||||||||| Sbjct 18699 ATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGCGGAGGCG 18651 >seq21 Length=521316 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || || || | Sbjct 163880 GATGCAGATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCCTGGAGGTCGAGTCCTC 163821 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||| ||||| || || || || ||||| || Sbjct 163820 GGACACTATCGACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCA 163761 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| | |||||||| || || ||||| |||||| | | | | || || || || Sbjct 163760 GCAACGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAA 163701 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || ||| |||| | || |||| || ||| Sbjct 163700 CATCCAGAAGGAGAGCACCCTTCACCTGGTCCTCCGTCTGCGTGGTGGC 163652 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || || || || || | | Sbjct 163371 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 163312 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||| ||||| || || || || ||||| || Sbjct 163311 GATACCATCGACAACGTGAAGAGCAAA-ATCCAGGACAAGGAGGGTATCCCGCCCGACCA 163253 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || | ||||| ||||| || ||| ||||||| ||| | || || || Sbjct 163252 ACAGCGACTTATCTTCGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTAAGCGACTACAA 163193 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||||||||| || ||| |||| Sbjct 163192 CATCCAGAAGGAATCGACGCTGCACCTGGT 163163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897037628000