Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 187 4e-41 seq7 127 3e-23 seq69 104 4e-16 seq19 98.7 2e-14 seq15 86.0 1e-10 seq14 86.0 1e-10 >seq1 Length=3626568 Score = 187 bits (206), Expect = 4e-41 Identities = 195/254 (77%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| |||||||| |||||| |||||| |||||||||||||| ||| Sbjct 1873800 TGACGCCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGA 1873741 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| |||||| | ||| ||||||| | ||||| ||| ||| |||| Sbjct 1873740 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTGTCGTTGCCGA 1873681 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | ||||| |||||||||||||||||||| || |||||||| ||||||| |||||| Sbjct 1873680 GGGCGACG--AGCAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 1873623 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || |||||| | |||| ||| ||||| | ||||||||| ||||| Sbjct 1873622 CATGCCGAGCAGGGCGCAGGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATCTCCACGGC 1873563 Query 794129 CTCGATGATGATCT 794142 ||| |||||| || Sbjct 1873562 ATCGGTGATGACCT 1873549 Score = 107 bits (118), Expect = 3e-17 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| ||||||||||| |||||||||||| Sbjct 1873477 CCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCGCGCTTC 1873418 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||||| ||| ||| ||| ||||| |||||||||||||| ||| Sbjct 1873417 TTCAGCCAGAAGATGGACGCGAAGGCGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAG 1873358 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||| || |||| |||||| ||| | | || | | |||||||||| ||||| Sbjct 1873357 GCGATCAGGCGCTGGGCAAAGGTGGACTTCCGGTC---GGTAATCCACTTCAGGGCCCAA 1873301 Query 794521 TCTGCCTT 794528 || ||||| Sbjct 1873300 TCGGCCTT 1873293 Score = 93.3 bits (102), Expect = 7e-13 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTGG-TCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 ||||| ||||| ||||||||| ||| | | | | || ||||||| ||| |||||||| Sbjct 1873215 GTGTCAATGGCATTGAAGAGGTGGGTCCGT-TGGGCGGGCTCCTTGATGTACGTGTCGAT 1873157 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||| || ||||||||||| ||||||||||| || || ||| ||||| || || ||||| Sbjct 1873156 GAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCA 1873097 >seq7 Length=944196 Score = 127 bits (140), Expect = 3e-23 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 |||||| | || || |||||| || | ||||| || ||||| ||| || | ||||||| | Sbjct 14610 CTGCCGGCGGGGCGGCACAAGCTGGTGATCCTGGACGAGGCGGACAGCATGACGTCGGGG 14551 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || |||||||| || || ||| ||||| | ||| | |||||||||||||| ||| | Sbjct 14550 GCGCAGCAGGCGCTGCGGCGGACGATGGAGATCTACTCGAACACGACGCGGTTCGCGTTC 14491 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || |||||| |||| | | ||||||| | || ||| || ||||| ||| |||| Sbjct 14490 GCGTGCAACCAGTCGAACAAGATCATCGAGCCGCTGCAGTCGCGGTGCGCGATCCTGCGG 14431 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGC 2019414 | | ||| || || ||||| ||| ||| | ||| |||| Sbjct 14430 TACGGGCGGCTGACGGACGCGCAGGTCGTCAAGCGGCTGC 14391 >seq69 Length=1216614 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| | || ||||| ||||||||| |||| || ||| | || |||||||| || |||||| Sbjct 788773 GCCTCTAATTACCTTGACATCAAGGCCCTGCTTGATGTTGGCTGCAAGACAGTCGCCAAC 788832 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || |||||||| ||||| ||||| || || |||| | ||| Sbjct 788833 ATGATCAAGGGCAAATCTCCCGAGGAGATCCGAAAGACGTTCAATATCACGAACG 788887 >seq19 Length=544932 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| || || || ||||||||| ||||||| || || | | Sbjct 14690 GTACTTGGTGACGGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCCAGCTCACCAGGTAG 14631 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| |||| |||||| ||||| |||| Sbjct 14630 GATCAGGCGGACGGAGGTCTGAATCTCCCGGG 14599 >seq15 Length=644973 Score = 86.0 bits (94), Expect = 1e-10 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || |||| |||||| | ||| | ||| |||||| || | || || | Sbjct 160851 AGGCCAGGGCACTCGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTC 160910 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || || |||||| |||| || | ||||| ||||| || ||| ||||||| || Sbjct 160911 ATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTA 160970 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| || || || | |||| | || | |||||||||||||| |||| Sbjct 160971 CCGTGGTTCTTACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAG 161030 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| || |||||| ||| || Sbjct 161031 ATGGCAAAGGCACCAGGCCGCTTGTTGCCACC 161062 >seq14 Length=2677235 Score = 86.0 bits (94), Expect = 1e-10 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 653959 CACGGGCGAGCCCATGGAGGCGTTGATCTTTTCGGCGCCGGTCTACTACCAGGCCCTGCG 654018 |||||| ||||| || |||||| ||||| | |||| ||||||||||| ||| Sbjct 2252417 CACGGGGGAGCCGCTGCAGGCGTACATCTTCAACGGGCCGATCTACTACCAGCGGCTGAA 2252358 Query 654019 CCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGC-GGCCCCGTGCAGATGCTCACCA 654077 ||| ||| |||||||| ||| | ||| | ||| ||||||| || || ||||| Sbjct 2252357 GCACATGGTGCAGGACAAGATGCACTCGCGGTCTCGCGGGCCCCGGGC-CATCCTCACGC 2252299 Query 654078 AGCAGCCGGTCGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 |||||| ||||||||| ||| |||||| | |||||||| ||||||||| Sbjct 2252298 GCCAGCCGACCGAGGGCCGCAGCCGCGACGGCGGCCTGCGCCTCGGCGAGATGGAG 2252243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916235762543900