Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq21 167 2e-36 seq72 154 1e-32 seq47 93.3 3e-14 >seq21 Length=521316 Score = 167 bits (184), Expect = 2e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| ||||||||||||||| ||||| ||||| || ||| |||| |||| Sbjct 163668 AGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCC 163727 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || ||||||||||| |||| | ||||||||||| Sbjct 163728 TCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGAATGCCCTCCTTGTCC 163787 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | || || |||||| || | ||| |||||| Sbjct 163788 TGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 163847 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || ||||||||||| Sbjct 163848 TTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 163879 Score = 118 bits (130), Expect = 7e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| ||||||||||||||| ||||| || ||| | || |||| Sbjct 163388 AGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCC 163447 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| ||| |||||||| | || | ||||||||||| Sbjct 163448 TCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 163507 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | || || ||| || || | ||| || ||| Sbjct 163508 TGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGTC 163567 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 ||||| || |||||||| || Sbjct 163568 TTTCCGGTCAGGGTCTTGAC 163587 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || |||||||| ||||| ||||| ||| | || | || Sbjct 163160 AGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGCGTTCGGCCGTCC 163219 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||| ||||| || ||||| |||| | ||||||||||| Sbjct 163220 TCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGCGGGATACCCTCCTTGTCC 163279 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | || | || | |||||| |||| ||| |||||| Sbjct 163280 TGGATTTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTC 163339 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 163340 TTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 163371 >seq72 Length=40277 Score = 154 bits (170), Expect = 1e-32 Identities = 176/234 (75%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || | |||||||||||| | ||||||||||||||| ||||| |||||||| Sbjct 18653 CCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 18712 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || | || || || ||||| |||||||| ||||| || |||||||| | || Sbjct 18713 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGG 18772 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | ||||||||||| | || || ||||| || | ||||| || | | ||| Sbjct 18773 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT--TGTCGATGGTGTCGCTCGACTC 18828 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || | ||| || ||||| |||||||||||||| || |||||||||||||| Sbjct 18829 CACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 18882 >seq47 Length=1462733 Score = 93.3 bits (102), Expect = 3e-14 Identities = 133/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || |||| || || ||||| |||||||| | Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | ||||||||||| | || || ||||| || Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGAC--AT- 1313671 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || | ||| || || | ||| |||||||| ||||| |||||||| Sbjct 1313670 -TGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 1313612 Query 34964 ACAAA 34968 || || Sbjct 1313611 ACGAA 1313607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692403061900