Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 7e-15 >seq14 Length=2677235 Score = 98.7 bits (108), Expect = 7e-15 Identities = 667/1064 (63%), Gaps = 15/1064 (1%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| |||||| || || | ||||| |||||||| | ||| || ||||| || || Sbjct 2316057 TTCTCAACGGCAGAGACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCGATC 2316116 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 |||||||| || | | || || || || || | | || | ||||| || Sbjct 2316117 TGAGGGACACCACGGGGCGCGGGCGGAATGCCGGTAAGCTCGAACTTGCCCAGCAGGTTG 2316176 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || || ||| | || ||||||||| | | ||||| || ||| || || Sbjct 2316177 TTGTCCTTGGTGCGCTGGCGCTCACCCTCGTAGACCTGGATGAGCACACCAGGCTGGTTG 2316236 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || || | || | || || || || || || || || ||||| | ||| Sbjct 2316237 TCGGAGAAGGTGGAGAAGACCTCCGACTTCTTGGTGGGGATGGTCGTGTTGCGGGGGATA 2316296 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||||| |||||||| || || || | ||| || || || || | ||| || | Sbjct 2316297 AGCTTGGTCATCATACCACCGGCGGTCTCGATACCGAGGGACAGCGGGGCGACGTCCAGA 2316356 Query 281717 AGGACAATAT--TTTGAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATA 281773 || | ||| | || | | || | | ||| | ||| || ||||| || || | Sbjct 2316357 AGCAGAATCTCGTTGGTGGACTTGGAGCTAGTGTCGCCAGACAGGATAGCAGCCTGGACG 2316416 Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833 |||||||| || |||||||| ||||| || || | | | || | | || || ||| Sbjct 2316417 GCAGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTG 2316476 Query 281834 AAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || | | | || || | ||| || || ||||| | || || || || | || Sbjct 2316477 AAGTAGTCGGCAATGAGCT-TCTGGACACGGGGGATACGCGTGGAGCCACCGACGAGAAC 2316535 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952 || || || ||||| || || || | || | ||| || || || ||||| | Sbjct 2316536 GATCTCGTGGACCTGAGACTTGTCGATCTTAGCATCGGCCAAGACACGGTCGACGGGCTG 2316595 Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GAG-T 282009 | | || || | ||| || || || |||||| | |||| |||| ||| | Sbjct 2316596 GATGGTGGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCTGGCTCGGGTAATGGAGGT 2316655 Query 282010 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 282068 | || || ||||| || ||||||| || || | ||||||| || || | |||| Sbjct 2316656 G----TAGAAGTCAATACCCTCGAACAGGGAGTCGATCTCAATCGAGGTCTGGGCAGAAG 2316711 Query 282069 AAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTG 282128 | || || | ||| || ||||| ||||| || || | || | ||| | || || | Sbjct 2316712 ACGACAGAGTACGCTTGGCACGCTCACAAGCGGTGCGGAGACGTCGGAGAGCACGAGC-G 2316770 Query 282129 ATTGATTCAAA-TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 282187 | || | || | || | || | |||||| || | || | | || ||| Sbjct 2316771 TTGGACGAGAGGTCCTTCTTGTGCTTGCGCTTGAATTCATTGACGAAGTGGTTGACCAGA 2316830 Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 || || || || || ||||| ||||| | ||| | || | || | | || | ||| Sbjct 2316831 CGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAG 2316890 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | || || || | | || ||| | ||||| ||| |||||||| | || ||||| Sbjct 2316891 ATACCCTCCTCGATGGTCAGAAGGGAGACATCGAAGGTACCACCACCAAGGTCGAAAATG 2316950 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 || ||||| || || || || |||||||| || || | || ||||| || Sbjct 2316951 AGGACATTGCGCTCGCCCTCGGACTTCTTGTCAAGACCGTAGGCGATGGCGGCAGCCGTG 2317010 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| || |||| | ||| || ||||||||||| || ||||| || || || Sbjct 2317011 GGCTCATTGATGATTCGGAGAACGTTCAGACCAGCAATGAGACCGGCATCCTTGGTAGCC 2317070 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || | || || ||||| || || || || || ||||| || || Sbjct 2317071 TGACGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTAATGACAGC 2317114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740625490422600