Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq15 242 4e-59 seq1 192 6e-44 seq72 134 1e-26 seq47 125 7e-24 seq21 122 8e-23 >seq15 Length=644973 Score = 242 bits (268), Expect = 4e-59 Identities = 875/1349 (65%), Gaps = 41/1349 (3%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTT 148109 |||||| |||||||||||| ||||||||||| || ||||| | | || ||| | Sbjct 159803 CGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCAGCCATCTGGACGACCGTCCGCTG 159862 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || |||||| | |||||||| || |||||| | |||||| | | ||| Sbjct 159863 AGAA--ATTTCCCAGACTGTCTTGTAAAGAGACTTGATGTCTGCGGGAACGTTGGGAATG 159920 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | ||||||| | |||| || | || ||| | || | | || Sbjct 159921 TTCTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTTCATGCCATCGGACCAAAGACCC 159980 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || ||| | | || || ||||| |||||||| || || || Sbjct 159981 ATATCCACGAGGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCAAGGACA 160040 Query 148290 CGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || || ||| || | |||| || | || || || | ||||||||||||| ||||| Sbjct 160041 CGGCG-AGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTG 160099 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 | ||| | || |||||||| || |||| || ||| |||| ||| | || Sbjct 160100 GGAGGTACTGGCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTT 160159 Query 148409 TATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468 || | | |||||| | |||||||||| || ||||| || || ||||||||||| Sbjct 160160 GATCTGGTCCTTCAGCGTTTCCCAGTCCCAAAGGTCGGACGGCGTGACATTCCACATGTC 160219 Query 148469 GTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 |||||| || ||||| | | || | || ||| ||||| | | ||| || || | | Sbjct 160220 GTACTGGAGTATGCC-CTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCA 160278 Query 148528 CCGCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || || | ||| || ||| || || || ||| ||| || |||||| || ||| Sbjct 160279 CCTTAGCAATTTCCGAGGACGCTGTCAAG-GCAGCGTGGTAGATTGTCTCGAAGATCTGC 160337 Query 148587 CTGTTGAGCAGCGCCGCCGACTCGC-TTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 |||| ||| | ||| || || ||| | ||||| || ||| || || | ||| Sbjct 160338 TTGTTCAGCTGTCTAGCC-TCTGGCGACTCGAAAGGCATGCGAAGCGCCAAGAAGGTGTC 160396 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||| ||||| || || | ||| ||||| |||||| |||||| | ||| || Sbjct 160397 AGCAAGACCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGCCTC 160456 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT 148765 | || || |||| ||| |||||||||||||| || ||| | || || |||| || Sbjct 160457 CGGGACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGT 160516 Query 148766 AATTCTGCGCAGCAATTCAAAATCGTA---------CTTGTCATCTACGATGCATCGGTT 148816 || | | | ||| | || ||||| |||| || |||| || ||| Sbjct 160517 AACTTCGTGAAGCTTCTGGAAGTCGTATACGCCTTCGTTGTAGTCCACGAAAGAT-GGT- 160574 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | |||| ||| || | ||||| || || |||||| ||||| |||||| || || Sbjct 160575 -AGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAAT 160633 Query 148877 CTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 || | |||||| || ||||| || | ||| | |||||| || |||||||||| Sbjct 160634 TTCAGTGCACAGGTTTGAGCTGCGAATGGT---GCCGAGGTTCTTCTGGTTGCTCTTGCG 160690 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT 148993 |||||| |||||||| |||||| | || |||||| || ||| | ||| | || Sbjct 160691 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAAT 160750 Query 148994 G--AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA- 149050 | | | | ||| | ||| || || | ||| | ||| ||||| |||||| Sbjct 160751 GGCATACCA--CAGCTTCTGGGCCTTGACCTTCTGACGGCCGCGGCCCTCAGCCTCGTAC 160808 Query 149051 -TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGT 149109 | ||| | || ||||||| | || |||||| |||| | || || ||||||| || Sbjct 160809 TTCTCGTACAAGGC--CTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGT 160866 Query 149110 GCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCA 149169 |||||||||||| | |||| |||||| | | || |||||||| || || ||||| | Sbjct 160867 TCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAA 160926 Query 149170 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 ||| || || | ||||||||| || | || || || ||| || | Sbjct 160927 TCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGA 160986 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 | | || | ||| | |||| |||||||||||| | ||| | || | || || Sbjct 160987 GATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAG 161046 Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 ||| ||||| ||||| || || | | | | ||||||| || || || | ||||| Sbjct 161047 GCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAG 161106 Query 149347 GTTCAATGCCACTGGCAGTGCCGTTAGTA 149375 | | || ||| ||| || ||||||||| Sbjct 161107 GGACGATACCATTGGACGTTCCGTTAGTA 161135 >seq1 Length=3626568 Score = 192 bits (212), Expect = 6e-44 Identities = 354/509 (70%), Gaps = 25/509 (5%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||||||||||||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 1873787 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTC 1873728 Query 120411 CATAAACTCGAACGGGTTGCTCG--CGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| |||||| | | || || | | ||| | ||| | |||||| Sbjct 1873727 CATGAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTGTCG--TTGCCGAGGGCGACGAGC 1873670 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || || ||||| ||||||| |||| | ||||||||||| |||| Sbjct 1873669 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGG 1873610 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA-- 120586 || |||| ||| |||| ||||||| ||| || ||||| || || ||| | Sbjct 1873609 GCGCAGGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATCTCCACGGCATCGGTGATGACC 1873550 Query 120587 ---TGG-CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGG 120642 ||| ||| | | | || ||||| || | | | |||| | | | |||| Sbjct 1873549 TTCTGGACGATC-TCCT-TGCTCGGGCGG-TTCT-TCAGGTGCGAGAACAG-----CAGG 1873499 Query 120643 CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGG 120702 || || ||||| ||||||||||||||||||||||| || ||||||||| || |||||| Sbjct 1873498 CAGGCGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTCAGG 1873439 Query 120703 CCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAAC 120762 |||||||| | ||| | |||| | |||| |||| || ||| ||| ||||| Sbjct 1873438 CCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAAGGCGCCGCTGAAGAAG 1873379 Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822 | ||||| ||| ||| ||||||| || ||||| ||| || || | ||| | |||| Sbjct 1873378 ATACCCTCGACGGCGGCGAAGGCGATCAGGCGCTGGGCAAAGGT---GGACTTCCGGTCG 1873322 Query 120823 ---ATCCACTTCATGGCCCACTCGGCCTT 120848 |||||||||| |||||| |||||||| Sbjct 1873321 GTAATCCACTTCAGGGCCCAATCGGCCTT 1873293 >seq72 Length=40277 Score = 134 bits (148), Expect = 1e-26 Identities = 124/157 (79%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| |||| || ||||||||||| ||||||||||| ||||| Sbjct 18724 GTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTT 18783 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | |||||| | | |||||| |||| ||||| Sbjct 18784 GTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGAT 18843 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||||| ||||||||| Sbjct 18844 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 18880 >seq47 Length=1462733 Score = 125 bits (138), Expect = 7e-24 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| |||| || ||||||||||| ||||||||||| |||||| Sbjct 1313752 TCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 1313693 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||||| | |||||| |||| ||||| | Sbjct 1313692 TCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATG 1313633 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 1313632 GTCTTGCCCGTCAGGGTCTTCACGAAA 1313606 >seq21 Length=521316 Score = 122 bits (134), Expect = 8e-23 Identities = 142/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | || | | | |||||||||||||| | Sbjct 163402 GGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCA-TCCTCGAGCTGCTTAC 163460 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||||||||| ||||| |||||||| |||||| || Sbjct 163461 CAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTTGACT 163520 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| || ||| || |||| ||||| || || |||||||| | Sbjct 163521 TGACGTTGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGTCTTTCCGGTCAGGG 163580 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 163581 TCTTGACGA 163589 Score = 122 bits (134), Expect = 8e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | ||||| || ||||||||||| || ||||| |||||| Sbjct 163725 TCCTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGAATGCCCTCCTTG 163784 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||||| | || | ||||| | || ||| || || | ||||| | Sbjct 163785 TCCTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGGGTGATG 163844 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || ||||| || ||||| |||||||| Sbjct 163845 GTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 163879 Score = 118 bits (130), Expect = 1e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | |||| ||| ||||| || ||||| |||| || ||| |||| |||||| | Sbjct 162938 AAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAACGT--ACGACCGTCCTCCA 162995 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || ||| ||||||| |||||||| || || || |||||||||||||| | Sbjct 162996 GCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAA 163055 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||| | | ||| || || | |||| ||| || | Sbjct 163056 TCTTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGTCTTCC 163115 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| |||||||| Sbjct 163116 CCGTAAGAGTCTTGACGAAGATCTGCAT 163143 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || || || ||||| || ||||| |||| | ||| || || ||||| | |||||| | Sbjct 163175 GTCGATTCCTTCTGGATGTTGTAGTCGCTTAGCGTTCGGCCG--TCCTCCAACTGCTTAC 163232 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| |||||||| ||||| || |||||||| ||| || || Sbjct 163233 CGGCGAAGATAAGTCGCTGTTGGTCGGGCGGGATACCCTCCTTGTCCTGGATTTTGCTCT 163292 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||| || || | ||||| ||| ||||||||||| | Sbjct 163293 TCACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGCG 163352 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 163353 TCTTGACGAAGATCTGCAT 163371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420195724000