Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq72 105 4e-18 seq21 100 2e-16 >seq72 Length=40277 Score = 105 bits (116), Expect = 4e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| || || |||||||| || || |||||||| || ||||| || || |||| || Sbjct 18671 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCG 18730 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| ||||||| ||||||||| || | || | || || ||||| Sbjct 18731 AGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 18790 Query 33661 ATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || || |||| ||| | ||||||||| || ||||| || | ||||| || | Sbjct 18791 ATCTTGCTCTTG--ACATTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCT 18848 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 18849 TGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 >seq21 Length=521316 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || || |||||||| || || |||||||| ||| Sbjct 162917 CCACCACGGAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 162976 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| |||| || || || || ||||| | |||||||||||| | || Sbjct 162977 AACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 163036 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| || ||| |||| ||| | |||||| ||| || || Sbjct 163037 ATGCCTTCCTTGTCCTGAATCTTGCTCTTC-ACATTGTCGATGGTGTCCGATGACTCAAC 163095 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || || || | || || || |||||||||||| Sbjct 163096 CTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACGAAGATCTGCATA 163144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703599392000