Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq66 138 1e-27 >seq66 Length=76900 Score = 138 bits (152), Expect = 1e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| || ||||| | |||||||||| | ||||||||||||||| |||| | |||| Sbjct 25351 AGCTGGATCTTCAGCGCGTCCACGTGGTCGCAGTAGACGTGCGCGTCGCCCATGACGTGC 25292 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 | | |||||| || || ||||| || | ||||| || ||||||| |||| Sbjct 25291 GTCAGGCTTCCCGGCACCAGCTCGCATACGTGCGCGATCATGTGCGTCAGCAGCGCGTAG 25232 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||| |||||||||||||| |||||||||||||| | |||| |||||||||||| || Sbjct 25231 CTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTCGCAGGACCGCTGGTACAGCTGACA 25173 Score = 136 bits (150), Expect = 5e-27 Identities = 207/292 (71%), Gaps = 2/292 (1%) Strand=Plus/Minus Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 || |||||| ||||| | |||||||| ||||| |||||||| ||||||||| Sbjct 25094 GGACACGTAGAACTGCGCGAACATGTGGCAGGGCGGGAGCGCCATCTTCTTCAGGTCCGC 25035 Query 147162 GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGAT 147221 ||||||||| || || | | ||||| | | ||| | || | || | ||| Sbjct 25034 GGGGTTCCACGCGCTGAGGATGATCCGCCGGTCGTACGGGCTGTTCCGGAGCTTGTGGAT 24975 Query 147222 AACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACC 147280 ||| ||||||||| |||||||| || | ||||| | || ||| ||| ||||| Sbjct 24974 GACCTCGGCCAGCTGGTCGACGCCCTGCCCGCTGTAGTCCGCCCTCGC-GTCGGCGTACT 24916 Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGT 147340 ||| || ||||||| ||||||||||||||| || || |||||||||||| || | || Sbjct 24915 CGGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCACGGT 24856 Query 147341 GCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 | |||| |||| | | | || |||||| | ||||||| | ||||||| || Sbjct 24855 GGGAGAGGCCCACGCCGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCATAT 24804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487270640000