Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 178 2e-38 seq7 105 1e-16 >seq1 Length=3626568 Score = 178 bits (196), Expect = 2e-38 Identities = 201/264 (76%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || || ||||| ||| ||||| ||||||||| | ||||| ||| |||| | ||||| Sbjct 1873546 AGAAGGTCATCACCGATGCCGTGGAGATCGAGCAGGAGTTCCTCACCGAGGCCCTGCCCT 1873605 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || ||||||||||||||| | |||||| |||||||| | | || |||||||| Sbjct 1873606 GCGCCCTGCTCGGCATGAACGCCAAC-CTCATGAAGCAGTACATCG-AGTTCGTCGCCGA 1873663 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||||||||||| || |||||| | || ||| |||||| | ||||||| ||| | Sbjct 1873664 CCGCCTGCTCGTCGCCCTCGGCAAC-GACAAGGTCTACCGCTCCACCAACCCCTTCGACT 1873722 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| |||||||||| |||||||||||||| |||||| ||||| ||||||| Sbjct 1873723 TCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGT 1873782 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || ||||||||||||| |||| Sbjct 1873783 ACCAGAAGGCCGGCGTCATGGCCA 1873806 Score = 111 bits (122), Expect = 2e-18 Identities = 156/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCC 1455952 |||| |||| ||||| || |||||| |||||||| || ||||||||| | || | Sbjct 1873003 GCACATCCTTGCCTTCTT-CGCCGCGTCTGATGGCATTGTCAACGAGAACCTTGTCGAGC 1873061 Query 1455953 GCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCA 1456012 | || | || ||||| | || ||||| || | || ||||| ||||| ||| | Sbjct 1873062 GGTTCAGTGGCGAAGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAAATCATGA 1873121 Query 1456013 TCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGG 1456072 | || ||||||||||| || |||||||| || || |||||||| ||| ||||||| || | Sbjct 1873122 TGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATCGACACGTACATCAAGGAGCCCG 1873181 Query 1456073 TCGAGAAGGA-CCACCTCTTTCGCGCCATCGACAC 1456106 | | | ||| ||||||||| ||||| ||||| Sbjct 1873182 CCCA-ACGGACCCACCTCTTCAATGCCATTGACAC 1873215 Score = 102 bits (112), Expect = 1e-15 Identities = 118/154 (77%), Gaps = 9/154 (6%) Strand=Plus/Plus Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAA--GGAGGGCCTCGACACTTTGCCGAGCG 1456183 |||||||| ||||| |||||||||| | | | ||| | || | ||||||| |||| Sbjct 1873293 AAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTCCAC----CTTTGCCCAGCG 1873348 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCT 1456241 || ||| ||| ||||| |||||||| ||||| ||| ||| ||| ||| |||||| Sbjct 1873349 CCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTC-GCGTCCATCT 1873407 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | ||||| |||||||||||||| |||||||| || Sbjct 1873408 TCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCT 1873441 >seq7 Length=944196 Score = 105 bits (116), Expect = 1e-16 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 || ||||| || || ||| | | |||||||| || || || |||||| | ||||||| Sbjct 14408 TGCGCGTCCGTCAGCCGCCCGTACCGCAGGATCGCGCACCGCGACTGCAGCGGCTCGATG 14467 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | |||| |||||| || | || ||||||||||| || | | | ||||| Sbjct 14468 ATCTTGTTCGACTGGTTGCACGCGAACGCGAACCGCGTCGTGTTCGAGTAGATCTCCATC 14527 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 ||| ||| || ||||| || ||| ||| ||| | || ||| |||||||| ||||| | Sbjct 14528 GTCCGCCGCAGCGCCTGCTGCGCCCCCGACGTCATGCTGTCCGCCTCGTCCAGGATCACC 14587 Query 333032 ATCTTGTGGCGCCCGTGCGGCAG 333054 | |||||| ||||| |||||| Sbjct 14588 AGCTTGTGCCGCCCCGCCGGCAG 14610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177801554816200