Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq72 131 2e-25 seq21 131 2e-25 seq47 111 1e-19 >seq72 Length=40277 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | | ||| || |||| || |||||||| || Sbjct 18683 GTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGCTGCTTGCCG 18742 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||||||||||| ||| | || |||||||||| |||||| ||| Sbjct 18743 GCGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTG 18802 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||||||||| |||||||| | ||||| || || ||||| | || Sbjct 18803 ACATTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTC 18862 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 18863 TTGACGAAGATCTGCAT 18879 >seq21 Length=521316 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | || |||||||| || |||||||| ||| | Sbjct 162917 CCACCACGGAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 162976 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || |||| |||||||||||||| || || || | |||||||| |||| ||| Sbjct 162977 AACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 163036 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| ||||| ||||| | | | | ||||| || || ||| Sbjct 163037 ATGCCTTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAACC 163096 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||||| || || ||||| | ||| || || || |||||||| Sbjct 163097 TCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACGAAGATCTGCAT 163143 Score = 116 bits (128), Expect = 3e-21 Identities = 130/171 (76%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | |||||| | || || ||||||||||| || || Sbjct 163408 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAA 163467 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||||| || |||||||||| |||||| ||| | || Sbjct 163468 GATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTTGACTTGA-CGT 163526 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | |||||| || || ||||| | |||||||| || || |||| Sbjct 163527 TGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGTCTTTCCGGTCA 163577 >seq47 Length=1462733 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | |||||| | || || |||||||| || || || | Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| ||| | || |||||||||| ||||| ||| | | | Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 1313668 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | |||||| ||| |||||||| | ||||| || || ||||||| || ||||| | Sbjct 1313667 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1313608 Query 35727 A 35727 | Sbjct 1313607 A 1313607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793036508000