Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq21 131 2e-25 seq47 114 1e-20 seq72 113 5e-20 >seq21 Length=521316 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| ||||||||||||||| | Sbjct 163373 CCACCGCGGAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAA 163432 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| || || || || ||||| |||||||| ||||| || Sbjct 163433 AGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 163492 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| ||| ||||| ||| | |||||||| || || || Sbjct 163493 ATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 163552 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 ||||| || || || || ||||| | || || |||| Sbjct 163553 TCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGACGA 163589 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || || | ||| |||| || | ||| || ||| ||||| || ||||||||||||| | Sbjct 162917 CCACCACGGAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 162976 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 ||| || || ||| || ||||| || || || ||||| | |||||||||||| || || Sbjct 162977 AAC-GTACGACCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGG 163035 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || || ||||| || || || ||| | ||||| || || || || Sbjct 163036 AATGCCTTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAAC 163095 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| || ||||| || ||||| Sbjct 163096 CTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACGAAGATCTGCAT 163143 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| || ||||||||||| | |||| | || ||| Sbjct 163671 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCG 163730 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | ||| ||||| |||||||| ||||| || || || || Sbjct 163731 AGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGG 163790 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | ||||| || || || || || || || ||||| || Sbjct 163791 ATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTG 163850 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || | ||| || ||||| || ||||| ||| Sbjct 163851 CCCGTGAGAGTCTTGACGAAGATCTGCATCTTG 163883 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| |||||||| || ||||||||||||| Sbjct 163145 CCACCACGGAGCCGGAGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTT 163204 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||| || || || || || | ||||| || |||||||| Sbjct 163205 AGCGTTCGGCCGTCCTCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGCGGG 163264 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || ||||| || || ||| | || || ||||| || || Sbjct 163265 ATACCCTCCTTGTCCTGGATTTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCGACC 163324 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || ||||| || ||||| Sbjct 163325 TCAAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 163371 >seq47 Length=1462733 Score = 114 bits (126), Expect = 1e-20 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | ||| | || |||||||| ||||| || |||| Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || ||||| || || || ||||| || ||||| || Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 1313668 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||||| ||||| ||||| || ||||| || || || | || || |||| Sbjct 1313667 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1313608 Query 134704 AA--ATTTGC 134711 || |||||| Sbjct 1313607 AACTATTTGC 1313598 >seq72 Length=40277 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || |||| || ||||| || ||| ||||| || ||||||||||| Sbjct 18653 CCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 18712 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || ||||||| ||||||||| || || || Sbjct 18713 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGG 18772 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||| ||| ||||| Sbjct 18773 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCACC 18832 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| || ||||| Sbjct 18833 TCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397768252000