Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq15 163 4e-35 >seq15 Length=644973 Score = 163 bits (180), Expect = 4e-35 Identities = 465/711 (65%), Gaps = 8/711 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| ||||| || | ||||| | | ||||| || || || || ||||| | | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 ||| | | | | || || || ||||| || || ||||||||||||||||| | ||| Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 || || | | | | || || || || || || ||||| || ||||| | | Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| || ||||| || || | || || || | | | || || || || || || ||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 ||||| | ||||| || ||||| || |||| | ||||| || | |||||||| || Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 | || || || || | || || || | || |||||| | ||| | ||| Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGATGGATATTCAAACCG 161183 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || ||||| || ||||| | ||||||| ||||| || || || |||||||| Sbjct 161184 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCG 161243 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG---ATGATGTATAGTT 69993 ||||||||||| |||| | | ||| || ||| || | || ||| || || Sbjct 161244 ATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGT---GTA 161300 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || || || || | || || || || |||||||| |||| |||| | || ||||| Sbjct 161301 CCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTAG 161360 Query 70054 GTTTCAATAGCTGATTCTATA-TCCCACTGATGAATTCCTATCGCGACACGCATCAACAT 70112 || ||||| | |||| | | ||| | || || | || |||||||| | ||| Sbjct 161361 GTCTCAATGACCTTCTCTACATTGTCACCCCAG-ATACCGACAGCAACACGCATAATCAT 161419 Query 70113 ATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGT 70172 ||||| |||| || || | || || | |||| ||||| || |||| ||| Sbjct 161420 GTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAAAGT 161479 Query 70173 TTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223 || || || || || | ||| ||||||| || || | |||| |||| Sbjct 161480 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGA 161530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907941364000