Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq21 104 2e-17 seq72 96.9 3e-15 >seq21 Length=521316 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | || |||| || ||||| ||||| ||| || Sbjct 162953 TCCTTCTGGATGTTGTAGTCGCTCAACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAA 163012 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| |||||||| || | || || || || |||||| | |||| | Sbjct 163013 ATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTCACATTG 163072 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||||| || || || || | || ||||| ||||| || || Sbjct 163073 TCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACG 163132 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 163133 AAGATCTGCATA 163144 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | ||| | |||| || | ||| || || || || || ||||||||||| Sbjct 163145 CCACCACGGAGCCGGAGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTT 163204 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| || | ||| ||||||||| | || || |||||||| || ||||| Sbjct 163205 AGCGTTCGGCCGTCCTCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGCGGG 163264 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||| ||| | |||| | | || | || || | | || || Sbjct 163265 ATACCCTCCTTGTCCTGGATTTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCGACC 163324 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| ||||| || || || ||||| |||||| Sbjct 163325 TCAAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 163372 >seq72 Length=40277 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||||||||||| |||| |||| || | || || || || || |||||||| Sbjct 18652 GCCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 18711 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || |||| |||||||| || |||||| |||| |||||||| || ||||| || Sbjct 18712 GAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGG 18771 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| | || | | || | ||||| | | || || Sbjct 18772 GATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCAC 18831 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| |||||||| || || || || ||||| ||||| Sbjct 18832 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933882111200