Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15 232 8e-56 >seq15 Length=644973 Score = 232 bits (256), Expect = 8e-56 Identities = 1163/1821 (64%), Gaps = 65/1821 (4%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 ||||| |||||||| || |||||||| || | ||||| | | ||||| | | Sbjct 159705 CGGAGGTAGTACATGCCCGTCTTGAGACCGAGCTTCCAACCAGTGAAGTGCATGCTGGTG 159764 Query 110423 AGCTTGGACATCGTTGGACTTTC-CATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 | |||| ||| || || || | |||| | ||||| ||| |||| |||||||| Sbjct 159765 ATCTTGCCCATGGTAGG-CTCACGCATGTGAATGTTCAGCGACTGAGACT--GGTCAATG 159821 Query 110480 AA-GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAAC 110535 || ||||| | || | || ||||| | | ||| | || || | |||||||| || Sbjct 159822 AATGCGCCACGGTCG-GCAGCCATCTGGACGAC---CGTCCGCTGAGAAATTTCCCAGAC 159877 Query 110536 TGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCC 110595 ||| || ||| |||||| || | || | | | || ||||| ||||| || Sbjct 159878 TGTCTTGTAAAGAGACTTGATGTCTGCGGGAACGTTGGGAATGTTCTGAATGGAGCC--- 159934 Query 110596 CGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 |||||| || || | | |||||| | | |||||| ||||| || | | ||||| Sbjct 159935 -GCCTTCGGCAATGATGCGGTTCTTCATGCCATCGGACCAAAGACCCATATCCACGAGGT 159993 Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711 | |||| || |||||| | ||||| || || ||| | | ||||| Sbjct 159994 CCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGA 160053 Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771 |||| | ||||| || || || ||||| || || |||| ||| || | ||| ||| | Sbjct 160054 TGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAG 160113 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| || |||| ||| | |||||| || | ||| |||| |||||| | ||||| | Sbjct 160114 TGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGATCTGGTCCTTCA 160173 Query 110832 GAACATCCCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCA 110888 | |||||||| | || | | || | || |||| ||||||| |||| || | Sbjct 160174 GCGTTTCCCAGTCCCAAAGGTCGGAC--GGCGTGACATTCC-ACATGTCGTACTGGAGTA 160230 Query 110889 CCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT 110948 || || || | ||||| || || | || || | || | | | ||| | || Sbjct 160231 TGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCAATTT 160290 Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008 | || ||| || || ||||| || || || || ||||| | |||| || Sbjct 160291 CCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGTC 160350 Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCG--GCACAAAATAAATACATCCGCGAGACCTT 111065 | || || || || ||| || | ||| || | || | | || || ||||| | Sbjct 160351 TAGCCTCTGGCGACTCGAAAGGCAT-GCGAAGCGCCAAGAAGGTG--TCAGCAAGACCCT 160407 Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGAT 111125 ||||||| | || || || | ||||||||| || || || || | || || | Sbjct 160408 GAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGCCTCCGGGACAGGGT 160467 Query 111126 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAA 111185 | | || ||| |||| ||| || || | | || | || || | ||| |||| Sbjct 160468 AGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGTAACTTCGTGAA 160527 Query 111186 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGA 111239 | || | | || | || |||| ||| || | ||| || |||| Sbjct 160528 GCTTCTGGAAGTCGTATACGC------CTTCGTTGTAGTCCACGAAAGATGGTAGCGCGA 160581 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 |||||||| ||||| ||||| |||||| | | |||||| | |||||| || | Sbjct 160582 GAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAATTTCAGTGC 160641 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | ||| || || ||| || || | ||||| ||||| ||||| |||||| || Sbjct 160642 ACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGAT 160701 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418 |||||||||||||| |||| | || ||||| ||||| | || |||||| || | ||| | Sbjct 160702 CCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCATACCACA 160761 Query 111419 ACATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 111477 | || | | || | | || || | | || ||||| ||||||||||| ||| | Sbjct 160762 GCTTCTGGGCCTTGACCTTCTGACG--GCCGCGGCCCTCAGCCTCGTACTTCTCGTACAA 160819 Query 111478 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 111537 ||| || ||||| ||||| | |||| || || || || || || || | || Sbjct 160820 GGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAG 160879 Query 111538 AGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 111597 || ||| | || | ||| || ||||||||||||||||| |||||||| || | Sbjct 160880 AGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAG 160939 Query 111598 AAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656 ||||| || | | ||| || ||| || | ||| ||||| || | |||||||||| Sbjct 160940 GAAGAGGTCGCGAGCACGGA-TCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACT 160998 Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG----ATCCCTTTCGACGC 111712 | | | ||||| |||||| ||||| | |||| || | | | || | | | Sbjct 160999 CGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTG- 161057 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | |||| ||||| | ||| ||| ||| || || || ||||| || | |||||| Sbjct 161058 CCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCA 161117 Query 111773 TCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | || || || || || ||| |||||| | |||| | | | |||||| | Sbjct 161118 TTGGACGTTCCGTTAGTACCGGCGATGTACGAG--CCAGTGGCACGAATACGATGGATAT 161175 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 || || ||||| || ||| ||| ||||| ||||| | || || | |||| Sbjct 161176 TCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGA 161235 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 |||| | ||| || ||||| | ||| ||||||||| || | ||||| | Sbjct 161236 TACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAG 161295 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTT 112008 |||||||||| ||||| |||||||| | || ||| |||| || ||| ||||| Sbjct 161296 GTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAA-GTA-TTTGCCAGACATGAG 161353 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| ||||| | ||| || | | || || ||| |||| || || ||||| Sbjct 161354 GTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAGATACCGACAGCAACACGCAT 161413 Query 112069 GAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTC 112128 | ||||| ||| || | || | || ||||||||||| |||| ||| | ||| Sbjct 161414 AATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTC 161473 Query 112129 AAGGGTTTTGAGACCAAAGTA 112149 | || |||| || ||||| Sbjct 161474 CAAAGTCTTGAAGCCGAAGTA 161494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031214960000