Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq15 214 2e-50 seq7 86.0 8e-12 >seq15 Length=644973 Score = 214 bits (236), Expect = 2e-50 Identities = 942/1462 (64%), Gaps = 57/1462 (4%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| || || || ||||| |||| ||| |||| || | Sbjct 160050 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTG 160109 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| | | ||||| || | ||| || | | | || | ||| Sbjct 160110 GCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGATCTGGTCC 160169 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGG 118358 || || | |||||||| | || | | | | | | |||||| || ||||| Sbjct 160170 TTCAGCGTTTCCCAGTCCCAA---AGGTCGGACGGCGTGACATTCCACATGTCGTACTGG 160226 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || || || || || | || || || || | || ||||||||||| |||| || Sbjct 160227 AGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCA 160286 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT- 118477 | ||| ||| ||| | ||| ||||| || ||||| || || || | |||| Sbjct 160287 ATTTCCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGC 160346 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGA 118535 || || | |||| || || || | | || || | || | | || || ||| Sbjct 160347 TGTCTAG-CCTCTGGCGACTCGAAAGGCATGCGAAGCGCCAAGAAGGTG--TCAGCAAGA 160403 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC--- 118592 || || ||||| ||||| || || || |||| ||| || || || || |||| Sbjct 160404 CCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGC---CTCCGGG 160460 Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || || || | ||| ||||| | | | || || || | | ||| |||| || | | Sbjct 160461 ACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGTAACT 160520 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGGAAGG- 118709 || |||||||| | | | || | || |||| ||| | || | || || Sbjct 160521 TCGTGAAGCTTCTGGAAGTCGTATACGC------CTTCGTTGTAGTCCACGAAAGATGGT 160574 Query 118710 ---GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 |||| || |||| || || |||| | |||||| | | |||||| | |||| Sbjct 160575 AGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAATT 160634 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 || ||||||| |||||| || ||||||||| | |||||| || || ||| ||| Sbjct 160635 TCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 160694 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || ||||||||| |||||| | || | || ||||| || || | | |||||| || Sbjct 160695 CAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCA 160754 Query 118887 TTCCAGA-CATCGGCAGCTGGCACAG-TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTG 118944 | ||| | | || | || | | || || | | || ||||| |||||||||| Sbjct 160755 TACCACAGCTTCTGGGCCTTGACCTTCTGACG--GCCGCGGCCCTCAGCCTCGTACTTCT 160812 Query 118945 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 119004 ||| | ||| || ||||| ||||| | | || | || || || || | |||| Sbjct 160813 CGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGC 160872 Query 119005 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 119064 | | ||||| ||| | || || ||| || ||||||||||| ||||| || ||||| | Sbjct 160873 ACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAA 160932 Query 119065 GCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 | || |||||| || ||| || || || || | | || || || ||| | || Sbjct 160933 GAGCAAGGAAGAGGTCGCGAGCACGGATCTCCT-CTTTACCGTGGTTCTTACGGAGATCA 160991 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTT 119179 | || || | | ||||| ||||||||| |||| ||| | || | | ||| || Sbjct 160992 AGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGC 161051 Query 119180 ACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | | ||| |||| | ||||| ||||| ||| ||| || ||||| ||||| || | Sbjct 161052 TTGTTG-CCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGAC 161110 Query 119240 GATACCATCGGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCG 119297 |||||||| ||| || || || || ||| |||||| | | |||| | | | Sbjct 161111 GATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCC--AGTGGCACGAATACGA 161168 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 ||||| | || ||| ||||| || ||| ||| ||||| || || | || | Sbjct 161169 TGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTA 161228 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 ||||||| || ||||| ||| |||| | ||| ||||||||| || | || Sbjct 161229 TCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGC 161288 Query 119418 GGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--G 119474 | |||| ||||||||||||||||| || ||||| | || || |||| || ||| Sbjct 161289 G-CCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAA-GTA-TTTGCCA 161345 Query 119475 GACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 ||||| || ||||||||| | ||| | | |||| ||| | ||||||| Sbjct 161346 GACATGAGGTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAG---ATACCGACA 161402 Query 119532 GAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGG 119591 | || ||||||| ||||| || ||| | || | | | ||||||||| || | ||| Sbjct 161403 GCAACACGCATAATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGG 161462 Query 119592 TAACTCTTCTCCAAGGTCTTGA 119613 || | |||||| ||||||| Sbjct 161463 TAGGACCGCTCCAAAGTCTTGA 161484 >seq7 Length=944196 Score = 86.0 bits (94), Expect = 8e-12 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT-TGATTTTCACGGGCAACTT 14294 ||||| ||||||||| ||||| ||||| | ||| || ||| || | || || || Sbjct 473353 ACCGATGGCGTCAATCTCATCAATGAATATGATGCAGGGTGTGTGTCTC-CGTGCCGTGG 473411 Query 14295 CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGG 14354 | |||| ||||| |||| |||||||||||||||||||||||||| || | | Sbjct 473412 CGAAGAGGTCTCGGACTCGGGACGCACCGACACCCACAAACATCTCCACGAATTCCGAAC 473471 Query 14355 CG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413 || || | || ||| || || || || |||||| |||| ||||| | ||| Sbjct 473472 CGCTCACGCT-GAAGAATGGTACTCCTGACTCGCCCGCGGTGGCCTTCGCGAGCAACGTC 473530 Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || ||||| || || ||| || || | |||||||| || ||| ||||||| Sbjct 473531 TTACCCGTTCCAGGCGGCCCAGCAAGGATTGCACCACGCGGAATCTTGGCACC 473583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434426956000