Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15 251 8e-62 seq1 102 1e-16 >seq15 Length=644973 Score = 251 bits (278), Expect = 8e-62 Identities = 1136/1763 (64%), Gaps = 63/1763 (4%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG---ATTCT 104278 || ||| ||||| | ||||| || || ||||||| ||||| |||| || | Sbjct 161428 CCGCAGCACATGATTATGCGTGTTGCTGTCGGTATC--TGGGGT-GACAATGTAGAGAAG 161372 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 ||| | ||||| ||| || ||||| ||| || |||| ||| || | ||||||| Sbjct 161371 GTCATTGAGACCTACAACCTCATGTCTGGCAAA-TAC-TTCACTCATGCCTCCCCAACCC 161314 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 | ||||| ||||||||||| | || | || ||||||||| ||| | |||| Sbjct 161313 TTTTCAACGCTGGTACACCTCAGGCGCAGCTTTCATCCTGCTTCCTTGTCGATATGAAGG 161254 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | || ||| | |||||||| | || || | ||||| ||||| ||| || Sbjct 161253 ATGATAGCATCGAGGGTATCTACGATACCCTGAAAACTTGTGCTATGATCTCCAAGATGG 161194 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 104515 | || ||||| || || | |||||| | | | |||| | |||||| ||| || Sbjct 161193 CCGGTGGTATCGGTTTGAATATCCATCGTATTCGTGCCACTGG--CTCGTACATCGCCGG 161136 Query 104516 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || || || ||||||| | || ||||| || || || ||| ||| ||| | Sbjct 161135 TACTAACGGAACGTCCAATGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACCGCGAG 161076 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAGGGAT----CTATCGCAGTCTATCTTGAGCCAT 104630 ||||| |||| | ||| | | | || | | | || |||| | ||||| | Sbjct 161075 ATATGTTGATCAGGGTGG-CAACAAGCGGCCTGGTGCCTTTGCCATCTACTTGGAGCCGT 161017 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 ||||| ||||| | | ||||||||||| | ||| ||||| ||| | ||||| | | Sbjct 161016 GGCACTCGGATGTTTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGA-GATC 160958 Query 104691 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 |||| ||||| |||||| ||||| |||||||| || || ||||||||| | || ||| Sbjct 160957 CGTGCTCGCGACCTCTTCCTTGCTCTTTGGATTCCCGACCTTTTCATGAAGCGTGTCGAG 160898 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 ||| ||| | ||| ||||| | || || || || ||||| || |||||| | Sbjct 160897 AAGAACGGCGAGTGGACTCTCATGTGCCCGAACGAGTGCCCTGGCCTAGCCGATGTCTAC 160838 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 ||||| ||||| || ||| | ||| |||||||||| || || || | | || | Sbjct 160837 GGTGATGAGTTCGAGGCCTTGTACGAGAAGTACGAGGCTGAGGGCCGCGGCCGTCAGAAG 160778 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || | || | || | ||||| | || |||||| | |||| ||||||||||| | || Sbjct 160777 GT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACCGAGACTGGCAACCC 160719 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| || ||| |||| ||||| || || ||||| | || || Sbjct 160718 CTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCAT 160659 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 || || || || || || ||||| |||| | | | | |||||| ||||| Sbjct 160658 TCGCAGCTCAAACCTGTGCACTGAAATTGTGGAGTACTCGGCCCCCGATGAGGTCGCTGT 160599 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 105106 || ||| | ||||| |||| || || | ||||| | | | || ||| | || Sbjct 160598 CTGCAACTTGGCATCTCTCGCGCTACCATCTTTCGTGGA-CTACA-ACGAAGGCGTATAC 160541 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || || ||||||||||| | ||| | | ||||| |||| | || Sbjct 160540 GACTTCCAGAAGCTTCACGAAGTTACCCAGGTCGTCGTCCACAACCTGAACAAGATCATC 160481 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || || | ||||| || | || || || || ||| |||||||||| || Sbjct 160480 GACGTGAACTACTACCCTGTCCCGGAGGCACGCAACAGCAACATGCGACACCGTCCCATC 160421 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTG 105281 || || |||||||||||||| || || ||| ||| ||| |||| || | Sbjct 160420 GGCCTAGGTGTTCAGGGTCTTGCTGACACCTTC-----TTGGCGCTTCGCATGCCTTTCG 160366 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | || || || | | | || || || || ||||| || || ||||| || | Sbjct 160365 AGTCGCCAGAGGCTAGACAGCTGAACAAGCAGATCTTCGAGACAATCTACCACGCTGC-C 160307 Query 105342 TTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 |||| ||| || || | || |||| || || ||||| || | || || ||| Sbjct 160306 TTGACAGCGTCCTCGGAAATTGCTAAGGTGGAGGGCCCATACTCCACTTACGAAGGCTCT 160247 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCA 105456 || | ||||| || | || || | || |||| |||| || | | || | ||| Sbjct 160246 CCTGTCTCACAGGGCATACTCCAGTACGACATGT-GGAATGTCACGCCGTCCGACCTT-- 160190 Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 | ||||||||| | || ||||| | |||||| |||| ||| | || |||||| | | Sbjct 160189 -TGGGACTGGGAAACGCTGAAGGACCAGATCAAGCAGAATGGTGTGCGAAACAGTTTGTT 160131 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 |||| || ||||| || ||| ||| | || ||| |||| || || ||||| || || Sbjct 160130 GGTGGCCCCTATGCCCACTGCCAGTACCTCCCAGATCCTGGGCAACAACGAATGTTTCGA 160071 Query 105577 ACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 || ||||| | |||||||| ||| | | ||| || || ||||| | | |||| Sbjct 160070 GCCTTACACCTCCAACATCTACTCT-CGCCGTGTCCTTGCTGGCGAGTTCCAGGTCGTCA 160012 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || || | | |||||| || || ||||| |||||| | | |||||| | | Sbjct 160011 ACCCTTGGCTGCTCAAGGACCTCGTGGATATGGGTCTTTGGTCCGATGGCATGAAGAACC 159952 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | || || |||||||| || ||| | |||| || || ||| Sbjct 159951 GCATCATTGCCGAAGGCGGCTCCATTCAGAACATTCCCAACGTTCCCGCAGACATCAAGT 159892 Query 105756 AGTTGTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAG 105812 | ||| ||||| |||||||| || || | ||| | | ||||| || | Sbjct 159891 CTCTTTACAAGACAGTCTGGGAAATTTCTCAGCGGACG---GTCGTCCAGATGGCTGCCG 159835 Query 105813 ATCGTGGTCGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG-GAAAGTCCA 105868 | ||||| ||| |||||||| | |||| ||| |||| | |||| | || || Sbjct 159834 ACCGTGG-CGCATTCATTGACC--AGTCTCAGTCGCTGAACATTCACATGCGTGAG-CCT 159779 Query 105869 ACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGG 105928 || ||| |||| || | |||||| | |||||||| |||||||| ||||| Sbjct 159778 ACCATGGGCAAGATCACCAGCATGCACTTCACTGGTTGGAAGCTCGGTCTCAAGACGGGC 159719 Query 105929 ATGTATTACCTCCGATCTAAGGC 105951 ||||| |||||||| || |||| Sbjct 159718 ATGTACTACCTCCGTACTCAGGC 159696 >seq1 Length=3626568 Score = 102 bits (112), Expect = 1e-16 Identities = 154/215 (72%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 ||| || || |||| ||| || |||||||| |||||||| || || ||||| Sbjct 1873274 AGTCCCCTGCATTCGCCGGAAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTC 1873333 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 ||||||| |||| || |||| || || || ||||||||||||||| || Sbjct 1873334 CA---CCTTTGCCCAGCGCCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGG 1873390 Query 94851 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 ||||| ||| | || | ||||| |||||||| || || ||||| || || ||||| Sbjct 1873391 CGCCTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCT 1873449 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||| ||||| || |||||||| || ||| Sbjct 1873450 CCAACGAGCTCATCTCGCGCGACGAGGGCCTGCAC 1873484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260070924000