Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq66 140 3e-28 >seq66 Length=76900 Score = 140 bits (154), Expect = 3e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 29833 CAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATC 29892 ||| ||||| ||| | ||||| | ||||||||| ||||||||| ||||||| || Sbjct 25382 CAGCGTGGGGAAGTCGCGCGGCTCGCGCTCGAGCTGGATCTTCAGCGCGTCCACGTGGTC 25323 Query 29893 CAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGA 29951 ||||||||| ||||| |||| | ||| | || || |||||| | ||| || | Sbjct 25322 GCAGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCT-TCCCGGCACCAGCTCGCATA 25264 Query 29952 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 30011 |||| || ||||||| ||| || || | ||||||||||||||| ||||| || || || | Sbjct 25263 CGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGGC 25204 Query 30012 CCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 ||||||| | |||| |||||| |||||||| Sbjct 25203 CCATGTCGCAGGACCGCTGGTACAGCTGACA 25173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309904809200