Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq21 114 1e-20 >seq21 Length=521316 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || |||||||| ||| | || || || || || || | |||||| | ||||| Sbjct 163587 GTCAAGACCCTGACCGGAAAGACGATCACCCTCGAGGTTGAGTCCTCCGACACCATTGAC 163528 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| ||| ||||| ||||| || ||||| || ||||| || ||||| || || Sbjct 163527 AACGTCAAGTCAAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGATTGATC 163468 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||| || || || | || || | ||| ||||||| ||||||||||| |||||| Sbjct 163467 TTCGCTGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCCGACTACAACATTCAGAAGGAG 163408 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | || | ||| | ||| | || ||||| || Sbjct 163407 TCCACCCTCCACCTCGTTCTTCGTCTCCGCGGTGGTAT 163370 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || ||||| || || |||| Sbjct 163371 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 163312 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||||| || ||||| || || || || ||||| ||| Sbjct 163311 GATACCATCGACAACGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCGCCCGACCAA 163252 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACAA 27166 ||||| | || | |||||| || || ||||| ||| | ||| || | ||| ||||| Sbjct 163251 CAGCGACTTATCTTCGCCGGTAAGCAGTTGGAGGAC-GGCCGAACGCTAAGCGACTACAA 163193 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| ||||| | || ||||| | || | || ||||| || Sbjct 163192 CATCCAGAAGGAATCGACGCTGCACCTGGTTCTCCGGCTCCGTGGTGGTAT 163142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917856352000