Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq66 109 5e-19 >seq66 Length=76900 Score = 109 bits (120), Expect = 5e-19 Identities = 210/303 (69%), Gaps = 14/303 (5%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT---TC 34378 || || ||||| ||||||| ||||||| || || || |||||| ||| ||| || Sbjct 24795 GGTGTCAAGATATGGGACGGCAACGGGTCGCGCGAGTTCCTGGACG-GCGTGGGCCTCTC 24853 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 ||| | | |||| |||||| ||||||| |||||||| ||||||||| | ||||| || Sbjct 24854 CCACC--GTGAGGTCGGCGACCTGGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTCGGC 24911 Query 34439 GCGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTA 34497 || ||||| || | |||| | ||||||| || ||||| | ||||||||| | Sbjct 24912 GCCGAGTA-CGCCGACGCGAGGGCGGACTACAGCGGGCAGGGCGTCGACCAGCTGGCCGA 24970 Query 34498 CGTGATCGACACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTG 34554 || ||| ||| | |||||| || | ||| | ||||| | | ||||||| Sbjct 24971 GGTCATCCACAAGCTC---CGGAACAGCCCGTACGACCGGCGGATCATCCTCAGCGCGTG 25027 Query 34555 GAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTA 34614 |||||| ||| || |||||||||||| || ||||||| || || ||||| Sbjct 25028 GAACCCCGCGGACCTGAAGAAGATGGCGCTCCCGCCCTGCCACATGTTCGCGCAGTTCTA 25087 Query 34615 CGT 34617 ||| Sbjct 25088 CGT 25090 Score = 109 bits (120), Expect = 5e-19 Identities = 210/303 (69%), Gaps = 14/303 (5%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| || || ||||||| || |||||||||||| || ||| ||| Sbjct 25090 ACGTAGAACTGCGCGAACATGTGGCAGGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGG 25031 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGATC 6844 |||||||||| | | ||||| | ||| | || |||||| | ||| ||| Sbjct 25030 TTCCACGCGCTGAGGATGATCCGCCGGTCGTACGGGCTGTTCCG---GAGCTTGTGGATG 24974 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTC 6903 || | ||||||||| | ||||| || ||||||| | |||| | || ||||| Sbjct 24973 ACCTCGGCCAGCTGGTCGACGCCCTGCCCGCTGTAGTCCGCCCTCGCGTCGGCG-TACTC 24915 Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGA 6963 || || ||||| | ||||||||| |||||||| ||||||| |||||| |||| | | Sbjct 24914 GGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCAC--GG 24857 Query 6964 TGGGA---ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020 ||||| ||| ||| |||||| || || || ||||||| ||||||| ||||| || Sbjct 24856 TGGGAGAGGCCCACGC-CGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCATATCTTGAC 24798 Query 7021 CCC 7023 || Sbjct 24797 ACC 24795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261839672000