Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq21 181 2e-40 seq72 159 8e-34 seq47 129 1e-24 >seq21 Length=521316 Score = 181 bits (200), Expect = 2e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| ||| ||| || |||||||| || || | ||||| | ||||| Sbjct 163668 AGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCC 163727 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||| ||||| || |||| || ||||||||| Sbjct 163728 TCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGAATGCCCTCCTTGTCC 163787 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| ||| || ||||| || ||||| ||| Sbjct 163788 TGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 163847 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||||||||| || || | |||||| || Sbjct 163848 TTGCCCGTGAGAGTCTTGACGAAGATCTGCATCTT 163882 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || || ||||| || || | |||||| | ||||| Sbjct 163388 AGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCC 163447 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| ||||||| || ||||||||| Sbjct 163448 TCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 163507 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || ||||| || |||||||| ||| ||||||||||| ||||||||| Sbjct 163508 TGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGTC 163567 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 163568 TTTCCGGTCAGGGTCTTGAC 163587 Score = 143 bits (158), Expect = 6e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| | ||| || ||| ||| || |||||||| || || | ||| | | | || || Sbjct 162932 AGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAACG-TACGACCGTC 162990 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||||||||||| || ||||| || || || || || || || |||| ||||||||||| Sbjct 162991 CTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTC 163050 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| ||||| || ||||||||||| || |||||||| || ||||| || Sbjct 163051 CTGAATCTTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGT 163110 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| |||||||| || || | |||||| Sbjct 163111 CTTCCCCGTAAGAGTCTTGACGAAGATCTGCAT 163143 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || || || || |||||||| || || || || | || || Sbjct 163160 AGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGCGTTCGGCCGTCC 163219 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || ||||||||||| || |||||||| || || | || ||||||||| Sbjct 163220 TCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGCGGGATACCCTCCTTGTCC 163279 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || |||||||| |||||||| || || || ||||| || ||||| ||| Sbjct 163280 TGGATTTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTC 163339 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 163340 TTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 163371 >seq72 Length=40277 Score = 159 bits (176), Expect = 8e-34 Identities = 165/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||| || |||||||| || |||| ||||||| || || Sbjct 18668 AGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 18727 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || || || || ||||| ||||| | || ||||||||| Sbjct 18728 TCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 18787 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||||||||| ||| || |||||||| ||||| Sbjct 18788 TGGATCTTGCTCTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCGAGGGTGATA 18844 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 18845 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 >seq47 Length=1462733 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| ||||| || Sbjct 1313785 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 1313726 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| ||||| | || ||||||||||| ||||| || || || ||| Sbjct 1313725 AGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCG 1313666 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 1313665 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1313607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150514836500