Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq15 181 1e-40 >seq15 Length=644973 Score = 181 bits (200), Expect = 1e-40 Identities = 471/715 (66%), Gaps = 16/715 (2%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || | ||||| | | |||||||| || || |||||||| | | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || || || | | || || || ||||| || || || || ||||| ||||||| || Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 || || || | | || || || || ||||| ||||| || ||||| | | Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| || ||||| || || | || || || | | ||||| || || || || ||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | |||||| |||||||| || | || | | ||| || | ||||| || || Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCC-- 78282 ||||| || || || | || || ||| | || |||||| | ||||||| | Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGA----TGGATATTCAA 161179 Query 78283 --CTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340 | || || || |||||||| || || | ||| ||| ||||| |||||||||||||| Sbjct 161180 ACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACC 161239 Query 78341 CTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 78400 ||| || || |||||| |||| | | ||| || ||| || | || ||| || Sbjct 161240 CTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGT 161299 Query 78401 TCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTA 78460 || || || || | || || || ||||| || || |||| |||| | || ||||| Sbjct 161300 ACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTA 161359 Query 78461 TGTTTCAATAGCTGATTCTA---TGTC-CCATTGATGAATTCCTACCGCTACACGCATCA 78516 || ||||| | |||| |||| || | || || || || |||||||| | Sbjct 161360 GGTCTCAATGACCTTCTCTACATTGTCACCCCAG----ATACCGACAGCAACACGCATAA 161415 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 ||| ||||| ||||| || || |||| || | |||| | ||| || |||| Sbjct 161416 TCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCA 161475 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGA 78631 |||| || || || || || | ||| ||||||| || || | |||| |||| Sbjct 161476 AAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGA 161530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667931664000