Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq15 183 4e-41 >seq15 Length=644973 Score = 183 bits (202), Expect = 4e-41 Identities = 587/902 (65%), Gaps = 18/902 (2%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || | ||||| | | ||||| || || ||||| ||||| | | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| || | | || || || ||||| || || || || ||||| ||||||| || Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || || | | || || || || ||||| ||||| |||||||| | | Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| || ||||| || || | || || || | |||| || || || || || ||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | |||||| || ||||| || | || | | ||| || | || || || || Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || || || || || | || || ||| ||||||||| | ||| | || Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGATGGATATTCAAACCG 161183 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || ||||| || ||||| | |||||| ||||| || || ||||| ||||| Sbjct 161184 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCG 161243 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || ||||||||| |||| | | ||| || ||| || | || ||| || || Sbjct 161244 ATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGTACCA 161303 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || || | || || || ||||||||||| |||| |||| | || ||||| || Sbjct 161304 GCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTAGGTC 161363 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGA------ATTCCTACAGCGACACGCATCAAC 77113 ||||| || ||||| || ||||| | | || || ||||| |||||||| | | Sbjct 161364 TCAATGAC--CTTCTCTA---CATTG-TCACCCCAGATACCGACAGCAACACGCATAATC 161417 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173 || ||||| |||| || || |||| || | |||| | ||| || |||||| Sbjct 161418 ATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAAA 161477 Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233 || || || || || || | ||| ||||||| || || | |||| | || | | Sbjct 161478 GTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGAGTCGAAA 161537 Query 77234 TTGTCCTTATATTTGGTAACAATATC-CATGAC-AGTGGTAGAAATAATTGGAGATCGTA 77291 | ||||| | | | ||||| ||| | | | ||| | ||| || || ||| Sbjct 161538 TCCTCCTTGTGTCTCATAACACAATCATACGTCTCCTGG--GCAATCATGGGGGATGCCT 161595 Query 77292 TTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTAC-GTCGCTAAATAGtttt 77350 | |||||| | || || ||||||| | | ||| | || | || || | || Sbjct 161596 TGCCATTTCTGGGGTTGACATAGTGGTAGAGGTCACTGACGACAGACG-ACCATTGCTTC 161654 Query 77351 tttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 ||||| | |||||| || || || ||||| || | || || || || ||||||||||| Sbjct 161655 TTTGTCTGCTTGTGGAGGTTTGACACGGCGATACGTGCGGCGAGGATGGCATAGTCAGGG 161714 Query 77411 TG 77412 || Sbjct 161715 TG 161716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933508832000