Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq21 217 3e-51 seq72 152 1e-31 seq47 131 4e-25 seq1 105 1e-17 seq19 93.3 9e-14 seq14 93.3 9e-14 >seq21 Length=521316 Score = 217 bits (240), Expect = 3e-51 Identities = 186/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | ||||| || || |||||||||||||||| Sbjct 163653 CCACCACGCAGACGGAGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAG 163712 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || |||||||| | |||||| ||||| |||| Sbjct 163713 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGA 163772 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||||| || ||| | |||||||||||||| | ||||| Sbjct 163773 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACC 163832 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||| | |||||| ||||| |||||||| || Sbjct 163833 TCCAGGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCATCTT 163882 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | ||| ||| || |||||||||||||| Sbjct 163144 ACCACCACGGAGCCGGAGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCGCT 163203 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||| ||||| | || || ||||| ||||| | || |||||||| ||| Sbjct 163204 TAGCGTTCGGCCGTCCTCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGCGG 163263 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| ||||| |||||| || ||| | ||||| || ||||| | |||| Sbjct 163264 GATACCCTCCTTGTCCTGGAT-TTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCGA 163322 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 163323 CCTCAAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 163371 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | ||| || || || ||||||||||| | Sbjct 163372 ACCACCGCGGAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 163431 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 163432 AAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGG 163491 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||||| || ||| | || || ||||| || | || || Sbjct 163492 AATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAAC 163551 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||||||||| || |||| ||||| |||| Sbjct 163552 CTCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGACGA 163589 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | ||||| || || |||||||||||||| Sbjct 162917 CCACCACGGAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 162976 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| || || ||||| || || || || || || || | ||| || || || ||| Sbjct 162977 AACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 163036 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| || ||| ||||| || || | ||||| |||||||| | || || Sbjct 163037 ATGCCTTCCTTGTCCTGAATC-TTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAAC 163095 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | |||||| ||||| |||||||| Sbjct 163096 CTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACGAAGATCTGCAT 163143 >seq72 Length=40277 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || | ||||| || || |||||||||||||| | Sbjct 18653 CCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 18712 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||| || |||| ||| || ||||| || Sbjct 18713 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGG 18772 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||| ||||| || || | ||||| ||||| | || || Sbjct 18773 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCAC 18831 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 18832 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 >seq47 Length=1462733 Score = 131 bits (144), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 282904 TGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGG 282963 ||| | | || |||||||||||||| | || || ||||||||||| || || || |||| Sbjct 1313793 TGCGTACCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGG 1313734 Query 282964 CAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTA 283023 | || |||| ||| || ||||| || || ||||||||||| || ||||| | || | Sbjct 1313733 CGAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA 1313674 Query 283024 CGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 | | ||||| ||||| || | || || ||||| ||||| ||||| ||||||| |||| Sbjct 1313673 CATTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCT 1313614 Query 283084 TAACGAA 283090 | ||||| Sbjct 1313613 TCACGAA 1313607 >seq1 Length=3626568 Score = 105 bits (116), Expect = 1e-17 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||| || | || ||| || |||||||||| || | |||||| Sbjct 1873579 AGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGA 1873638 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || ||||| ||||| || || || | |||| || || || |||| || || | Sbjct 1873639 AGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGACAAGGTCT 1873698 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||||| |||||||||| || |||||| ||| || ||| || || || |||| Sbjct 1873699 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACT 1873758 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||| ||||| ||| |||| || || |||||| Sbjct 1873759 TCTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCC 1873793 Score = 93.3 bits (102), Expect = 9e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||| Sbjct 599440 ATTAGTATAGTGGTTAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 599381 Query 168812 T 168812 | Sbjct 599380 T 599380 >seq19 Length=544932 Score = 93.3 bits (102), Expect = 9e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||| Sbjct 523007 ATTAGTATAGTGGTTAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 523066 Query 168812 T 168812 | Sbjct 523067 T 523067 >seq14 Length=2677235 Score = 93.3 bits (102), Expect = 9e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||| Sbjct 833995 ATTAGTATAGTGGTTAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 833936 Query 168812 T 168812 | Sbjct 833935 T 833935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737858865400