Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq21 158 3e-33 seq47 154 4e-32 seq72 138 3e-27 >seq21 Length=521316 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| ||||||||||||||||| || ||| |||||||| | Sbjct 163589 TCGTCAAGACCCTGACCGGAAAGACGATCACCCTCGAGGTTGAGTCCTCCGACACCATTG 163530 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||||||||||||| || || || ||||| |||||||| ||| | | Sbjct 163529 ACAACGTCAAGTCAAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGATTGA 163470 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || |||||||| ||||| | || ||| |||| || ||| | || || | Sbjct 163469 TCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCCGACTACAACATTCAGAAGG 163410 Query 178111 AATCAACACTGCATCTTGTT 178130 | || || || || || ||| Sbjct 163409 AGTCCACCCTCCACCTCGTT 163390 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||||| ||||| || ||| ||| Sbjct 163876 CAGATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGAC 163817 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| |||||||| || || || || || ||||||||| Sbjct 163816 ACTATCGACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAGCAA 163757 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || | || || ||| || Sbjct 163756 CGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATC 163697 Query 178104 CAAAAAGA 178111 || || || Sbjct 163696 CAGAAGGA 163689 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||| ||||| || || || Sbjct 163368 CAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGAT 163309 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || || || |||||||| || || ||||| || ||||| || Sbjct 163308 ACCATCGACAACGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCGCCCGACCAACAG 163249 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || ||| | || || || | || || ||| || ||| || Sbjct 163248 CGACTTATCTTCGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTAAGCGACTACAACATC 163189 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || ||||| || ||| Sbjct 163188 CAGAAGGAATCGACGCTGCACCTGGTT 163162 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| || ||||| || || ||| Sbjct 163140 CAGATCTTCGTCAAGACTCTTACGGGGAAGACCATCACGCTGGAGGTTGAGTCATCGGAC 163081 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| ||||| || || ||||| ||||| Sbjct 163080 ACCATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAGCAG 163021 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || | || | ||| || ||| || Sbjct 163020 CGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGTCGTACGTTGAGCGACTACAACATC 162961 Query 178104 CAAAAAGA 178111 || || || Sbjct 162960 CAGAAGGA 162953 >seq47 Length=1462733 Score = 154 bits (170), Expect = 4e-32 Identities = 147/187 (79%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 177924 CAAAT--TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG 177981 ||||| ||||||||| || || || || || || ||||||||||||||||| || | Sbjct 1313599 CAAATAGTTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCG 1313658 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || ||||| |||||||||||||| || || |||||||||||||||| Sbjct 1313659 ACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGC 1313718 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || |||||||| || |||||||| ||||| | || || |||| || ||| Sbjct 1313719 AGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACA 1313778 Query 178102 TCCAAAA 178108 |||| || Sbjct 1313779 TCCAGAA 1313785 >seq72 Length=40277 Score = 138 bits (152), Expect = 3e-27 Identities = 146/191 (76%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || ||||||||||||||||| ||| Sbjct 18876 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC--- 18820 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| || ||||| ||||| |||||||| || || ||||||||||||||| Sbjct 18819 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 18760 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || |||||||| || |||||||| || || |||| || | || || ||| Sbjct 18759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCTCGGACTACAAC 18700 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 18699 ATCCAGAAGGA 18689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729657719400