Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 165 2e-35
>seq1655
Length=66175
Score = 165 bits (182), Expect = 2e-35
Identities = 573/878 (65%), Gaps = 21/878 (2%)
Strand=Plus/Plus
Query 229772 ATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAG 229831
|||| | || ||| | |||||||||||||| | ||| ||||||||||| | |||||
Sbjct 51318 ATCCATAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGA 51377
Query 229832 TTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGAACGTCATT 229891
| |||| | || | ||||||| || ||||| |||||||| || |
Sbjct 51378 TCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCT 51437
Query 229892 TCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGC 229951
||||| ||| |||| | || ||||| | ||||||||| || || | || || || |
Sbjct 51438 TCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCT-C 51496
Query 229952 A--GACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCA 230009
| || | ||| |||| || || | | || ||||| || || || | || |||
Sbjct 51497 ATTGAGCG-CTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCA 51555
Query 230010 AACATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTTATCGACGCGCTTATTTC 230069
|| | | || ||||| || || ||| | || || ||||| | || ||
Sbjct 51556 AATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACA--TACATC 51613
Query 230070 CGACGAGC--AAGAACGGAACG-AGCTTTTTGATGCCATTGAAAACATCCCGGCGGTTCA 230126
| ||||| ||| | | ||| | || || | ||||| || |||||||| | |
Sbjct 51614 AG-CGAGCCCAAGCAACGCACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCG 51672
Query 230127 TAACAAGGCAAAGTGGGCTCAGAAATGG--CTAGAACCTGGTAAATCG---TTTGCCGAG 230181
||| ||||| | ||||| | | |||| || || | || ||| ||||||
Sbjct 51673 TAAGAAGGCTGACTGGGCGCTGCGATGGATCTCCGACAAG--AACTCGACCTTTGCCTGC 51730
Query 230182 CGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCAT 230240
|||||| |||||| | | || || || | || ||||| ||| ||| ||||
Sbjct 51731 CGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTC-GCGTCCAT 51789
Query 230241 CTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAG 230300
||| ||| || ||| ||| | ||||| |||||| | || |||||| |||||
Sbjct 51790 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTC 51849
Query 230301 TCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359
|| |||||||| | || || | | |||| | || ||| || | ||| | ||||
Sbjct 51850 CCGTGACGAGGGCATGCA-CACCGACTTCGCCTGCCTGCTGTTCTCCCACCTCAACAACA 51908
Query 230360 AGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGT 230419
||| | || | || || || | ||||| || || || |||| | ||| ||||||
Sbjct 51909 AGCCATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGT 51968
Query 230420 TCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGT 230479
| | ||||| | |||||| || | || |||||||| | || ||| | ||||
Sbjct 51969 TTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAGT 52028
Query 230480 ACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACT 230539
||||||| ||||| |||||||| | | | ||||| || || |||| ||||||
Sbjct 52029 ACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACG 52088
Query 230540 CTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCG 230599
| | |||||||| | ||||||||| ||| || || ||| || |||||||||||||
Sbjct 52089 CCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTCG 52148
Query 230600 AAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
| ||||||||| | ||||| || | | | ||||| |||
Sbjct 52149 AGAAGCGTGTCGGCGACTACCAAAAGGCCGGTGTCATG 52186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057774218471990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |