Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 82.4 6e-11
>seq2698
Length=105416
Score = 82.4 bits (90), Expect = 6e-11
Identities = 182/268 (68%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 101996 TGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CTTTATATTCTGCTCCGAAATG 102054
||||| || || | |||| |||| || ||| ||| ||| || || |||||||| ||
Sbjct 66687 TGGTCCACGCCCTTTCCTGTATAGTC-CGCATGACAGTCTTCGTACTCGGCTCCGAAGTG 66629
Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAG 102114
|| ||| || || ||||||||||| || | |||||| || ||||||| || || |
Sbjct 66628 CCGCCATTGGAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTGTCCAAGTCCTAC 66569
Query 102115 TTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG-CCAGCTGCTGATA 102173
| || || || ||| || ||||| ||||||| ||||||||| | | | || |
Sbjct 66568 GCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATGTGCACGTTCTGGT-CTTGCA 66510
Query 102174 GCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCC 102233
|| |||| || || || || | |||||||||||| || | | |||| |||
Sbjct 66509 GCAGTTTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCTCGGCGAGAACAGCTCGTA 66450
Query 102234 AAAATACTCTCTTAGTAGTTAAAAGTGG 102261
|| |||| ||| || || | |||||
Sbjct 66449 GGAAGACTCGCTTGGTGGTGAGGAGTGG 66422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361235028702923
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |