Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2698 82.4 6e-11 >seq2698 Length=105416 Score = 82.4 bits (90), Expect = 6e-11 Identities = 182/268 (68%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 101996 TGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CTTTATATTCTGCTCCGAAATG 102054 ||||| || || | |||| |||| || ||| ||| ||| || || |||||||| || Sbjct 66687 TGGTCCACGCCCTTTCCTGTATAGTC-CGCATGACAGTCTTCGTACTCGGCTCCGAAGTG 66629 Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAG 102114 || ||| || || ||||||||||| || | |||||| || ||||||| || || | Sbjct 66628 CCGCCATTGGAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTGTCCAAGTCCTAC 66569 Query 102115 TTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG-CCAGCTGCTGATA 102173 | || || || ||| || ||||| ||||||| ||||||||| | | | || | Sbjct 66568 GCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATGTGCACGTTCTGGT-CTTGCA 66510 Query 102174 GCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCC 102233 || |||| || || || || | |||||||||||| || | | |||| ||| Sbjct 66509 GCAGTTTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCTCGGCGAGAACAGCTCGTA 66450 Query 102234 AAAATACTCTCTTAGTAGTTAAAAGTGG 102261 || |||| ||| || || | ||||| Sbjct 66449 GGAAGACTCGCTTGGTGGTGAGGAGTGG 66422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361235028702923