Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 363 2e-95
seq3230 120 3e-22
seq2882 109 6e-19
seq2320 91.5 2e-13
>seq1655
Length=66175
Score = 363 bits (402), Expect = 2e-95
Identities = 572/804 (71%), Gaps = 15/804 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || |||
Sbjct 51326 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 51385
Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | |||| | |||||| |||||||| ||||||
Sbjct 51386 TCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCT 51445
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| ||||| ||| ||| || |||||||| ||||| || | |||||
Sbjct 51446 CACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCTCATTGAGCGC 51505
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||||||| | ||||||| || ||||||||||| || || ||| |||
Sbjct 51506 TTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATG 51565
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932
|||||| | ||||| || | || || ||||||||| || ||| | || | ||
Sbjct 51566 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACATACATCAGCGAGCCCAAG 51625
Query 116933 GAGAAGCTCCGT--TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990
| | || ||| | || ||||||||||| | || || ||| || ||||||| |
Sbjct 51626 CA-ACGC-ACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGTAAGAAGGCTG 51683
Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGGCC 117049
| ||||||||||| |||||| ||| || ||| || |||| | | || || | |||
Sbjct 51684 ACTGGGCGCTGCGATGGATCTCCGACA-AGAACTCGACCTTTGCCTGCCGTCTCATCGCC 51742
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || ||| |||||||| ||||||| || || ||||| |||| || ||| | |||
Sbjct 51743 TTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTCGCGTCCATCTTCTGGTTGAAG 51802
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| || || |||||||||||||| || ||| |||||||||||||||| | ||||||||
Sbjct 51803 AAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGC 51862
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC- 117228
|||| |||||| ||||| |||||||| || | || | | | | | |
Sbjct 51863 ATGCACACCGACTTCGCCTGCCTGCTGTTCTCCCACCT-CAACAACAAGCCATCAAACCA 51921
Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288
| || || ||| ||||||| || || | |||||||||| || ||||| || ||
Sbjct 51922 GGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGTTTCTCACAGACGC 51981
Query 117289 GCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346
|| || ||||| || || ||| | || || || | |||| || ||||||||||||
Sbjct 51982 CCTCCCATGTGCG-CTCCTCGGAATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTTC 52039
Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406
||||||||| | || || || | || | | | |||||||||||| | | |||||
Sbjct 52040 GTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGCCACAAACCCC 52099
Query 117407 CTGGACTTTATGAACCTCATCTCC 117430
| ||||||||| | |||||||
Sbjct 52100 TTCGACTTTATGGAGAACATCTCC 52123
>seq3230
Length=199858
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || |||||| | || || || | |
Sbjct 170329 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 170388
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || || | ||||| |||||||| ||| |||||||
Sbjct 170389 GACACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 170448
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | |||| ||| ||||| || || || |||| ||||| ||| ||||||||||
Sbjct 170449 CAGCGATTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACGCTCTCCGACTACAAC 170508
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| | || || ||||| ||
Sbjct 170509 ATCCAGAAGGAATCGACTCTCCATCTCGT 170537
Score = 116 bits (128), Expect = 4e-21
Identities = 105/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| ||||| |||||||| || | |||||||| || ||||||| ||| || ||
Sbjct 170185 AAGATTCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAG 170244
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | ||||||||||| |||||||||||||||||||||| |||| || ||
Sbjct 170245 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 170304
Query 40894 CTAGTGTTGCGC 40905
| ||| | |||
Sbjct 170305 TTGGTGCTCCGC 170316
Score = 113 bits (124), Expect = 5e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||||||||| || || ||||| ||||| || ||||| | || || ||| | |
Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| || || ||||| |||| ||
Sbjct 170617 GACACGATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCA 170675
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || ||||||| ||| ||||| ||||| || |||| || || || || |||||
Sbjct 170676 ACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAA 170735
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| ||||||||| ||| |||||
Sbjct 170736 CATTCAGAAGGAGAGCACCCTGCA 170759
>seq2882
Length=147932
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| |||| || || | |||||| | |
Sbjct 6766 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 6707
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | || || ||||| ||||| ||||||| || ||| |
Sbjct 6706 GACAACG-TCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATT 6648
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || || || || || | || ||||| | ||||||||||||||| ||
Sbjct 6647 GATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAA 6588
Query 40878 GG 40879
||
Sbjct 6587 GG 6586
>seq2320
Length=314285
Score = 91.5 bits (100), Expect = 2e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || |||||||| ||||||| || || || |||| ||| ||||| || || ||
Sbjct 232792 GACAAGGAAGGCATCCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTCGAG 232733
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|| | |||||||| |||||||||||||||||||||| | || || ||
Sbjct 232732 GATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 232683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515195544998480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |