Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 136 5e-27
>seq3230
Length=199858
Score = 136 bits (150), Expect = 5e-27
Identities = 175/236 (74%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009
|||||||||||| | | ||| | |||||| |||| ||||||||||| ||||| |||||
Sbjct 170790 CTATTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTA 170731
Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069
||||| || ||||| |||| || |||||||| || ||||| ||||| ||||| || ||
Sbjct 170730 ATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATC 170671
Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTC 43127
| || | | ||||||| | ||| | || | |||| ||| | | | ||||||
Sbjct 170670 CGGTGGGATTCCTTCCTTGT-CTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGAT 170613
Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || || | ||||| || ||||| || || ||||| || || ||||||||
Sbjct 170612 GATTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571791346424440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |