Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 113 3e-20
>seq3230
Length=199858
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||||||||| ||| || |||| || | |||||||| |||||
Sbjct 170520 TTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAA 170461
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | ||||| ||||| ||| | || ||||||||| ||||| ||| | ||
Sbjct 170460 GATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATT 170401
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | || | ||| || || |||| ||||| || ||||||||||| || || ||
Sbjct 170400 GTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGAC 170341
Query 34378 AAAGATCTGCAT 34389
|||||||||||
Sbjct 170340 GAAGATCTGCAT 170329
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | ||||||| ||| | || || || ||||| |||||||| || ||
Sbjct 170784 TCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGA 170725
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| || | ||||||||| ||||| ||||| ||||| || || ||
Sbjct 170724 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGG 170665
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||||| ||||| ||| | | | | |||| || | ||||| ||
Sbjct 170664 GATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAAC 170605
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||||||||| || || || || || |||||
Sbjct 170604 TTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Score = 82.4 bits (90), Expect = 5e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | ||| || ||||| |||||||||||| || || | ||
Sbjct 170312 AGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCC 170253
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| ||||| ||||||||||| || | || |||||||||
Sbjct 170252 TCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 170193
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | ||| | || ||||| || | |||||||||
Sbjct 170192 TGAATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCGACCTCAAGCGTGATGGTC 170133
Query 34358 TTGCCGGT 34365
|| || ||
Sbjct 170132 TTTCCAGT 170125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323057537782880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |