Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 407 1e-108
seq1655 197 1e-45
seq3230 104 2e-17
>seq1589
Length=144912
Score = 407 bits (450), Expect = 1e-108
Identities = 1017/1529 (67%), Gaps = 40/1529 (3%)
Strand=Plus/Minus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || || || |||||||| | | || || || ||| |||||| ||| | |
Sbjct 48029 GGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATG 47970
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571
| ||||| | || ||| |||| ||||| | ||| || || |||||||| || || |
Sbjct 47969 GCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGATGCAGTCGGCATGGGAGCGA 47910
Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631
|| |||||||| | | ||||||| | || || |||||| | ||||||||
Sbjct 47909 CGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCC 47850
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC--GACTCGC 22689
| ||||| | || |||||| ||||||| ||||| || | | |||| || ||
Sbjct 47849 AGAGATCAGTGGGAGTCACAC---CCCACATGTCGTACTGAAGCTCGCCCTTGGAAACG- 47794
Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749
|| ||| ||||| || ||||| || ||| | || || || ||||| ||
Sbjct 47793 -GGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAGATCGCATGAAGCGGT 47735
Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCG 22804
| || ||| ||| || ||||||||||| | |||| | | |||| || || |
Sbjct 47734 GAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAGCT-GGCGAGCCTCAGGAG 47676
Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864
| ||| | ||||| |||| || ||| || || || | ||| | || || | |
Sbjct 47675 AG----TCGAAAGGCATGCGCAGAGCCAAGAAAGCATCGGCAAGACCGTTGACACCGAGA 47620
Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCG 22922
||||| || |||| | || | ||| | |||| |||| || || ||
Sbjct 47619 CCGATGGGACGGTGACGGAAGTTG--CTCTTGCGAGCCTCTGGCACTGGGTAGTGGTTGA 47562
Query 22923 AATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAA 22982
||||| | |||||||||| |||| || ||| || | ||||
Sbjct 47561 CCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACCTGGTGGAGCTTGTCAA 47502
Query 22983 AGTCGTAAACGCCCGAT-----TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATT 23037
||||| |||||| || | ||| | || | || || ||||| || ||||| ||
Sbjct 47501 AGTCG-AAACGCTCGTTCTCAATGT-CGACGTAGGTGGGGAGGGCGAGAGATGCAAGGTT 47444
Query 23038 GCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACA 23097
||| ||||| ||||| || | |||||||| | || ||||| || || ||| |
Sbjct 47443 GCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGTTGGAGCT 47384
Query 23098 CTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCAT 23157
|| || ||||| || |||||||||| || | ||| | ||||||||||| ||
Sbjct 47383 GCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGTAGAGGAT 47324
Query 23158 GTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTG 23217
||| |||||||| |||||| ||| | ||||| ||| || ||| | |||||||| |
Sbjct 47323 GTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCGCG 47264
Query 23218 AACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGG 23276
|| ||| |||| ||| ||| || |||||| | ||||| | | || || || |
Sbjct 47263 GACT-GTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAG 47205
Query 23277 CACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAG 23335
| ||||| ||| || ||||| ||||| | | || ||||| | | |||| | | |
Sbjct 47204 CGCCGTAGACA-TCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAAGTGGTG 47146
Query 23336 TCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGG 23395
| | ||||| || |||| || ||||| || | ||| ||| ||||||||| ||||||
Sbjct 47145 TTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACCGTAGAACAAATCGCGG 47086
Query 23396 GCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCA 23455
|| || |||||||| || ||| |||||| | |||||| ||| || || || ||
Sbjct 47085 GCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCG 47026
Query 23456 TGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACG 23515
||||| ||||||| ||| | ||| || || || |||| ||| ||||||||||| ||||||
Sbjct 47025 TGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACG 46966
Query 23516 TAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCT 23575
|| || || |||||||| |||| | ||||| || |||||||||||||| | ||| |
Sbjct 46965 TAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTT 46906
Query 23576 ACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635
|| | | || | || || | | |||||||| || || ||||| ||
Sbjct 46905 GTACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAACGTTGAGTCCGATGCCGCCA 46846
Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695
| || || ||||| ||||| |||| |||||||||||||| || ||||||||
Sbjct 46845 GCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTAGATGCCATCAATGCTGTCA 46786
Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755
|| || | ||| | ||| || || | || || || ||||| || |||| ||||
Sbjct 46785 TCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCCGGCGCTGAAC 46726
Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814
|| || || || || || ||||| |||||||| ||| ||||| || || |||||
Sbjct 46725 AGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGTCTCAATGGC 46667
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
| |||||||| || ||||| || || | || || ||||| ||||| | ||| |||||
Sbjct 46666 AGACTCAATGTCATCACCGTGGATGCCAACAGCAACACGCATGATCATCTGTTGTGGTCT 46607
Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|||| ||| | |||||| || | | || ||||| | | || ||| || |||||
Sbjct 46606 CTCGGCAACCTT---GCCGTTGATCCTCAGAAGGTATGATCTCTCCAGCGTCTTGAATCC 46550
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGT 23960
||| || | ||||| |||||||||||||
Sbjct 46549 AAAGTATTGGTAGTTGAAGTCACGATCGT 46521
>seq1655
Length=66175
Score = 197 bits (218), Expect = 1e-45
Identities = 585/892 (66%), Gaps = 24/892 (3%)
Strand=Plus/Plus
Query 57551 TCCGATTGA-AT--ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTG 57607
||||| ||| || ||||| | || ||| | |||||||| ||||| || || || || ||
Sbjct 51304 TCCGACTGACATGCATCCATAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTG 51363
Query 57608 GACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC---CCTCAAAGA 57664
||||| ||| || | || ||||| |||||||| ||| ||| | |||||| ||
Sbjct 51364 GACCGCCGAGGAGATCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGA 51423
Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724
||| | || || ||||| |||| || ||||| || |||||||| || ||
Sbjct 51424 CGACGAGCGCTTCTTCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGT 51483
Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784
|| ||||| | | || | || ||| ||||| | | ||||| | |||||
Sbjct 51484 CAATGAGAACCTCATTGAGCGCTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTT 51543
Query 57785 TTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844
||||| || ||| | || || ||| | || || || | || || || ||||||||
Sbjct 51544 CTACGGTTTCCAAATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGA 51603
Query 57845 TACGTACGTGAAGGA---CAA-CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAA 57900
||| ||| | | || ||| | ||| ||||| || |||||||| ||||| | |
Sbjct 51604 TACATACATCAGCGAGCCCAAGCAACGC---ACGTAC-CTCTTCAACGCCATCGACAACA 51659
Query 57901 TGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA 57960
| || ||| |||||||| || ||| | | |||||| || || | |
Sbjct 51660 TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGATGGATCTC---CGACAAGAACT 51716
Query 57961 CG---TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|| || ||| | || ||||| || |||||| |||| || || ||||| || ||
Sbjct 51717 CGACCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGAT 51776
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
|| ||| | || || ||| ||||||| || || || ||||||||||| || || ||
Sbjct 51777 CATTCGCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCA 51836
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || |||||||| | || || || || || ||||| ||| ||| |
Sbjct 51837 ACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTCTCCC 51896
Query 58138 ACATTGTCAATAAACCGACGCGGGATCGCATCTTG--GACATTATCACCGAGGCGGTCGC 58195
|| | ||| || || | | | | ||| ||||| ||||||||||| || |
Sbjct 51897 ACCTCAACAACAAGCCATCAAACCA--GGTTGTTGAAGACATCATCACCGAGGCCGTTGT 51954
Query 58196 GATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGA 58255
||||| | |||||| |||| || ||||| || || | ||||| |||||| |
Sbjct 51955 CATCGAGCAGGAGTTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAA 52014
Query 58256 TTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGA 58315
| |||| ||||||| ||||| || |||||| | || | || | ||| |
Sbjct 52015 GCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCA 52074
Query 58316 GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAA 58375
| || |||||| | | ||| || || || |||||| | ||||| |||| |||||
Sbjct 52075 GAAGCACTACAACGCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAA 52134
Query 58376 GACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427
|| ||||| ||||| || || |||| || ||||| ||| || |||
Sbjct 52135 AACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAAAAGGCCGGTGTCATG 52186
>seq3230
Length=199858
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| ||||||||| | || || || ||||
Sbjct 170329 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 170388
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||| ||| | || || |||||
Sbjct 170389 GACACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 170448
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| ||||| || | |||||| | || | ||| || |||
Sbjct 170449 CAGCGATTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACGCTCTCCGACTACAAC 170508
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || ||||||||||| ||||| || ||
Sbjct 170509 ATCCAGAAGGAATCGACTCTCCATCTCGTCCT 170540
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| || || ||||| |||||||| | || |||||| | ||
Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||||| | || || || ||
Sbjct 170617 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCAA 170676
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||||| || || ||||| ||||| ||| | || |||
Sbjct 170677 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGAC 170712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445745933750160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |