Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1589 407 1e-108 seq1655 197 1e-45 seq3230 104 2e-17 >seq1589 Length=144912 Score = 407 bits (450), Expect = 1e-108 Identities = 1017/1529 (67%), Gaps = 40/1529 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | | || || || ||| |||||| ||| | | Sbjct 48029 GGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATG 47970 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || ||| |||| ||||| | ||| || || |||||||| || || | Sbjct 47969 GCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGATGCAGTCGGCATGGGAGCGA 47910 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | | ||||||| | || || |||||| | |||||||| Sbjct 47909 CGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCC 47850 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC--GACTCGC 22689 | ||||| | || |||||| ||||||| ||||| || | | |||| || || Sbjct 47849 AGAGATCAGTGGGAGTCACAC---CCCACATGTCGTACTGAAGCTCGCCCTTGGAAACG- 47794 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || ||| ||||| || ||||| || ||| | || || || ||||| || Sbjct 47793 -GGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAGATCGCATGAAGCGGT 47735 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCG 22804 | || ||| ||| || ||||||||||| | |||| | | |||| || || | Sbjct 47734 GAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAGCT-GGCGAGCCTCAGGAG 47676 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 | ||| | ||||| |||| || ||| || || || | ||| | || || | | Sbjct 47675 AG----TCGAAAGGCATGCGCAGAGCCAAGAAAGCATCGGCAAGACCGTTGACACCGAGA 47620 Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCG 22922 ||||| || |||| | || | ||| | |||| |||| || || || Sbjct 47619 CCGATGGGACGGTGACGGAAGTTG--CTCTTGCGAGCCTCTGGCACTGGGTAGTGGTTGA 47562 Query 22923 AATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAA 22982 ||||| | |||||||||| |||| || ||| || | |||| Sbjct 47561 CCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACCTGGTGGAGCTTGTCAA 47502 Query 22983 AGTCGTAAACGCCCGAT-----TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATT 23037 ||||| |||||| || | ||| | || | || || ||||| || ||||| || Sbjct 47501 AGTCG-AAACGCTCGTTCTCAATGT-CGACGTAGGTGGGGAGGGCGAGAGATGCAAGGTT 47444 Query 23038 GCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACA 23097 ||| ||||| ||||| || | |||||||| | || ||||| || || ||| | Sbjct 47443 GCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGTTGGAGCT 47384 Query 23098 CTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCAT 23157 || || ||||| || |||||||||| || | ||| | ||||||||||| || Sbjct 47383 GCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGTAGAGGAT 47324 Query 23158 GTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTG 23217 ||| |||||||| |||||| ||| | ||||| ||| || ||| | |||||||| | Sbjct 47323 GTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCGCG 47264 Query 23218 AACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGG 23276 || ||| |||| ||| ||| || |||||| | ||||| | | || || || | Sbjct 47263 GACT-GTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAG 47205 Query 23277 CACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAG 23335 | ||||| ||| || ||||| ||||| | | || ||||| | | |||| | | | Sbjct 47204 CGCCGTAGACA-TCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAAGTGGTG 47146 Query 23336 TCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGG 23395 | | ||||| || |||| || ||||| || | ||| ||| ||||||||| |||||| Sbjct 47145 TTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACCGTAGAACAAATCGCGG 47086 Query 23396 GCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCA 23455 || || |||||||| || ||| |||||| | |||||| ||| || || || || Sbjct 47085 GCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCG 47026 Query 23456 TGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACG 23515 ||||| ||||||| ||| | ||| || || || |||| ||| ||||||||||| |||||| Sbjct 47025 TGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACG 46966 Query 23516 TAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCT 23575 || || || |||||||| |||| | ||||| || |||||||||||||| | ||| | Sbjct 46965 TAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTT 46906 Query 23576 ACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635 || | | || | || || | | |||||||| || || ||||| || Sbjct 46905 GTACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAACGTTGAGTCCGATGCCGCCA 46846 Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695 | || || ||||| ||||| |||| |||||||||||||| || |||||||| Sbjct 46845 GCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTAGATGCCATCAATGCTGTCA 46786 Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755 || || | ||| | ||| || || | || || || ||||| || |||| |||| Sbjct 46785 TCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCCGGCGCTGAAC 46726 Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814 || || || || || || ||||| |||||||| ||| ||||| || || ||||| Sbjct 46725 AGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGTCTCAATGGC 46667 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 | |||||||| || ||||| || || | || || ||||| ||||| | ||| ||||| Sbjct 46666 AGACTCAATGTCATCACCGTGGATGCCAACAGCAACACGCATGATCATCTGTTGTGGTCT 46607 Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 |||| ||| | |||||| || | | || ||||| | | || ||| || ||||| Sbjct 46606 CTCGGCAACCTT---GCCGTTGATCCTCAGAAGGTATGATCTCTCCAGCGTCTTGAATCC 46550 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGT 23960 ||| || | ||||| ||||||||||||| Sbjct 46549 AAAGTATTGGTAGTTGAAGTCACGATCGT 46521 >seq1655 Length=66175 Score = 197 bits (218), Expect = 1e-45 Identities = 585/892 (66%), Gaps = 24/892 (3%) Strand=Plus/Plus Query 57551 TCCGATTGA-AT--ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTG 57607 ||||| ||| || ||||| | || ||| | |||||||| ||||| || || || || || Sbjct 51304 TCCGACTGACATGCATCCATAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTG 51363 Query 57608 GACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC---CCTCAAAGA 57664 ||||| ||| || | || ||||| |||||||| ||| ||| | |||||| || Sbjct 51364 GACCGCCGAGGAGATCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGA 51423 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 ||| | || || ||||| |||| || ||||| || |||||||| || || Sbjct 51424 CGACGAGCGCTTCTTCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGT 51483 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784 || ||||| | | || | || ||| ||||| | | ||||| | ||||| Sbjct 51484 CAATGAGAACCTCATTGAGCGCTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTT 51543 Query 57785 TTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844 ||||| || ||| | || || ||| | || || || | || || || |||||||| Sbjct 51544 CTACGGTTTCCAAATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGA 51603 Query 57845 TACGTACGTGAAGGA---CAA-CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAA 57900 ||| ||| | | || ||| | ||| ||||| || |||||||| ||||| | | Sbjct 51604 TACATACATCAGCGAGCCCAAGCAACGC---ACGTAC-CTCTTCAACGCCATCGACAACA 51659 Query 57901 TGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA 57960 | || ||| |||||||| || ||| | | |||||| || || | | Sbjct 51660 TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGATGGATCTC---CGACAAGAACT 51716 Query 57961 CG---TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 || || ||| | || ||||| || |||||| |||| || || ||||| || || Sbjct 51717 CGACCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGAT 51776 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 || ||| | || || ||| ||||||| || || || ||||||||||| || || || Sbjct 51777 CATTCGCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCA 51836 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 ||||| | || || || |||||||| | || || || || || ||||| ||| ||| | Sbjct 51837 ACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTCTCCC 51896 Query 58138 ACATTGTCAATAAACCGACGCGGGATCGCATCTTG--GACATTATCACCGAGGCGGTCGC 58195 || | ||| || || | | | | ||| ||||| ||||||||||| || | Sbjct 51897 ACCTCAACAACAAGCCATCAAACCA--GGTTGTTGAAGACATCATCACCGAGGCCGTTGT 51954 Query 58196 GATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGA 58255 ||||| | |||||| |||| || ||||| || || | ||||| |||||| | Sbjct 51955 CATCGAGCAGGAGTTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAA 52014 Query 58256 TTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGA 58315 | |||| ||||||| ||||| || |||||| | || | || | ||| | Sbjct 52015 GCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCA 52074 Query 58316 GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAA 58375 | || |||||| | | ||| || || || |||||| | ||||| |||| ||||| Sbjct 52075 GAAGCACTACAACGCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAA 52134 Query 58376 GACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||||| ||||| || || |||| || ||||| ||| || ||| Sbjct 52135 AACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAAAAGGCCGGTGTCATG 52186 >seq3230 Length=199858 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| ||||||||| | || || || |||| Sbjct 170329 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 170388 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | || || ||||| Sbjct 170389 GACACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 170448 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| || | |||||| | || | ||| || ||| Sbjct 170449 CAGCGATTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACGCTCTCCGACTACAAC 170508 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||||||||| ||||| || || Sbjct 170509 ATCCAGAAGGAATCGACTCTCCATCTCGTCCT 170540 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| |||||||| | || |||||| | || Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||| | || || || || Sbjct 170617 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCAA 170676 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || ||||| ||||| ||| | || ||| Sbjct 170677 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGAC 170712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445745933750160