Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2698 86.0 1e-11 >seq2698 Length=105416 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 35317 CAAGA--AGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGA 35374 ||||| |||| | ||||||||| | | ||||| || | |||| |||||||| | Sbjct 66512 CAAGACCAGAACGTGCACATCTGGGATGGCAATGGCTCAAGAGAATACTTGGACAGCGTA 66571 Query 35375 GGG-TTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCA 35433 || || || | |||| ||||||||||||||| || || || || ||||||||||| || Sbjct 66572 GGACTTGGAC-ACAGAGAAGAGGGAGATTTGGGTCCTGTGTATGGCTTCCAATGGCGGCA 66630 Query 35434 TTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGG 35481 || || || || || || |||| | | || ||||| |||||||| Sbjct 66631 CTTCGGAGCCGAGTACGAAGACTGTCATGCGGACTATACAGGAAAGGG 66678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989537429867715