Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 122 1e-22
>seq1655
Length=66175
Score = 122 bits (134), Expect = 1e-22
Identities = 370/569 (65%), Gaps = 12/569 (2%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || ||||| ||| ||||| |||||||| | || | ||||| ||
Sbjct 51891 AACAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAG 51832
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| |||||||| || |||||||| || | ||| || ||||| ||||||||||||
Sbjct 51831 AAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCG 51772
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 33752
|| |||||||| || || | || |||||||| || || | | || | ||
Sbjct 51771 GAGAAGAAGATGCCCTCGATGGCGGCAAAGGCGATGAGACGGCAGGC--AAAGGTCGAGT 51714
Query 33753 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33807
|| ||| ||||| | ||||| || |||||||| | || || || | |
Sbjct 51713 TCTTGTCGGAGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGT 51654
Query 33808 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867
| ||||| || ||||| || | || || || | | || |||||||| | |
Sbjct 51653 CGATGGCGTTGAAGAGGTACGTGCGTTGCTTGGGCTCGCTGATGTATGTATCGATGAGGA 51594
Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927
| || | || || || ||||| || || || || || |||||||| || | |
Sbjct 51593 GGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGG 51534
Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987
|||||| |||||||| ||| || || || || | || ||||| || |||||||
Sbjct 51533 CCTCGGGGATCTGCACCTCTCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCAT 51474
Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT---- 34043
| ||| || || || |||| || || || || | ||||| | |||
Sbjct 51473 CGGAGGCAGCGAAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTC-GTCGTTGAGG 51415
Query 34044 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 34103
| || ||||| || | | ||| || || | ||| | || || | ||||| || ||
Sbjct 51414 CGCTTGTTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAG 51355
Query 34104 GCCTCTGCCTTTTTATACATATTCCAGAT 34132
||||| ||||| || ||||| | ||||||
Sbjct 51354 GCCTCGGCCTTCTTGTACATTTGCCAGAT 51326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629788683499440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |