Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 118 2e-21
>seq1655
Length=66175
Score = 118 bits (130), Expect = 2e-21
Identities = 368/569 (65%), Gaps = 12/569 (2%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || || ||||| ||| ||||| |||||||| | || || ||||||||
Sbjct 51891 AACAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAG 51832
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| ||||| |||||||| || |||||||| || | ||| || |||||||| ||||| ||
Sbjct 51831 AAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCG 51772
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--- 50127
|| |||||||| || || | ||||||||||| | || | || | | | |
Sbjct 51771 GAGAAGAAGATGCCCTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTC 51712
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187
|||| ||||| | ||||| || |||||||| | || || || | ||
Sbjct 51711 TTGTCGGAGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCG 51652
Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247
||||| || ||||| || | || || || | | || |||||||| | ||
Sbjct 51651 ATGGCGTTGAAGAGGTACGTGCGTTGCTTGGGCTCGCTGATGTATGTATCGATGAGGAGG 51592
Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307
|| | || || || ||||| || || || || || |||||||| || | |||
Sbjct 51591 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCC 51532
Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367
|||| |||||||| ||| || || || ||| | || ||||| || ||||| ||
Sbjct 51531 TCGGGGATCTGCACCTCTCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCG 51472
Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAA------ATGTTTTTCGTTGGGTGTT 50421
||| || || || |||| || || || || | | |||||| |
Sbjct 51471 GAGGCAGCGAAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAG---G 51415
Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481
| || ||||| || | | ||| || || | ||| | || || | ||||| || ||
Sbjct 51414 CGCTTGTTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAG 51355
Query 50482 GCCTCTGCCTTTTTATACATATTCCAGAT 50510
||||| ||||| || ||||| | ||||||
Sbjct 51354 GCCTCGGCCTTCTTGTACATTTGCCAGAT 51326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718235822483720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |