Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 286 5e-72
seq1589 159 5e-34
>seq1655
Length=66175
Score = 286 bits (316), Expect = 5e-72
Identities = 599/878 (68%), Gaps = 31/878 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| ||||||| || ||||| | ||| ||| ||||||||
Sbjct 51326 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 51385
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || | | || ||||| || || ||
Sbjct 51386 TCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCT 51445
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197
||| | |||||||||| || | |||||||||||||||||| || || || |||| ||
Sbjct 51446 CACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCTCATTGAG-CG 51504
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| | |||| || || || |||| ||||| ||||| ||||||||||||||
Sbjct 51505 CTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 51564
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314
|||||| | ||||| || | ||||| || || || | ||||| |||| ||
Sbjct 51565 GGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACATACATCAGCGAGCCCAA 51624
Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
|||||| | || ||||| ||||| ||||||| | || | || ||||| |||||
Sbjct 51625 GCAACGCACGTAC---CTCTTCAACGCCATCGACAACATCCCATGCATCCGTAAGAAGGC 51681
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| | |||| | | || |||||| ||| | || || | | ||| | | || | ||
Sbjct 51682 TGACTGGGCGCTGCGATGGATCTCCGACAAGAACTCGACCTTTGCCTGCCGTCTCATCGC 51741
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
|| |||||| | |||||||||||||| || || || ||| ||||||| ||| | ||
Sbjct 51742 CTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTCGCGTCCATCTTCTGGTTGAA 51801
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
|||||| || ||||||||||| || || | |||||| | || || || ||||||||
Sbjct 51802 GAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 51861
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
| | ||| ||||| ||| || ||||| || || | || | | | || |
Sbjct 51862 CATGCACACCGACTTCGCCTGCCTGCTGTTCTCCCACC--TCAACAACAAGCCATCA-AA 51918
Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
|||| | || | | ||||| | ||||| ||||| || || || |||||||
Sbjct 51919 CCAG-GTTGTTGAAGACATCA------TCACCGAGGCCGTTGTCATCGAGCAGGAGTTTC 51971
Query 125674 TAACCGAATCCCTACC-GGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
| || || |||| || || || | | || |||||| |||||| |||||| |||||
Sbjct 51972 TCACAGACGCCCTCCCATGTGCGC-TCCTCGGAATGAACGCCAAGCTCATGTGCCAGTAC 52030
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAAC 125789
|| ||||| || || || ||||| || | | | || || ||| ||||||
Sbjct 52031 ATCGAGTTCGTCGCCGACCGTCTCCT---CCTGGCACTCGGCAACCAGAAGCACTACAAC 52087
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
|||| || ||||| || || ||| | ||| || || | || || |||||||| |||
Sbjct 52088 GCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTC 52147
Query 125850 GAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885
|||||| ||| |||| ||| ||| || |||||||
Sbjct 52148 GAGAAGCGTGTCGGCGACTACCAAAAGGC--CGGTGTC 52183
>seq1589
Length=144912
Score = 159 bits (176), Expect = 5e-34
Identities = 331/485 (68%), Gaps = 6/485 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || || || || ||| | ||| | ||| | || || |||||||| ||
Sbjct 46973 CAGGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTACATCGAGCCATGGCACGCAGAT 47032
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || ||| | || | ||||| ||| || || |||| || ||| | ||
Sbjct 47033 GTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCCCGCGAT 47092
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
||||| || | ||||||||||| ||| ||||||||||||| || | | | | ||
Sbjct 47093 TTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAAGCGTGTTGA-GCAGAACACCAC 47151
Query 97056 -TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114
|||| | |||||||| || || ||||||||| | ||| || |||| |||||
Sbjct 47152 TTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTT 47211
Query 97115 TGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCAC 97173
|||| |||| | ||||||| |||||| | |||||||| |||| || |
Sbjct 47212 CGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGAGAC-AGTCCGCGCTC 47270
Query 97174 GAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232
|||| || ||| | |||||| | ||||||| ||||| || || || ||||| |||
Sbjct 47271 -AGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGCACGCCATACATCCTC 47329
Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
|||||||| | | || |||| |||||||| ||||||| |||||| |||||
Sbjct 47330 TACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAGAACTTGGGGACCATCCGCAGCTCC 47389
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| || ||||| || || | |||||| | |||| || ||| || || ||| ||
Sbjct 47390 AACCTCTGCACCGAGATCATCGAGTACACTGCTCCTGATGAGGTCGCCGTGTGCAACCTT 47449
Query 97353 GCATC 97357
|||||
Sbjct 47450 GCATC 47454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741025176119480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |