Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2842 104 4e-18
>seq2842
Length=133559
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || |||||||| |||||||||||||| || ||
Sbjct 24234 GCGAAGCGTCACCGCAAGATTT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCAAT 24292
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||| |||||||| ||||||||||| ||||||||| ||||
Sbjct 24293 CCGCCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATCTC 24331
Score = 84.2 bits (92), Expect = 3e-12
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | ||| | |||| ||||||| || || |||| ||| |
Sbjct 24398 TGATCTACGAGGAGACCCGCGGAGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 24457
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| |||||||| | || ||||||| |
Sbjct 24458 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTCGTCTACG 24517
Query 16656 CATTGAAACGTCAAGGCCG 16674
| | || |||||||||||
Sbjct 24518 CCCTCAAGCGTCAAGGCCG 24536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071841750389
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |