Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 280 4e-70
>seq1589
Length=144912
Score = 280 bits (310), Expect = 4e-70
Identities = 1154/1792 (64%), Gaps = 37/1792 (2%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATT 363444
||| ||| |||| |||||| |||||| ||| ||||| ||| | ||||| || | ||
Sbjct 46543 ATACTTT-GGATTCAAGACGCTGGAGAGATCATACCT-TCTGAGGATCAACGGCAAGGTT 46600
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
| || | || || || ||| | |||||||||||| |||| ||||| | || ||
Sbjct 46601 GCCGAGAGACCACAACAGATGATCATGCGTGTTGCTGTTGGCATCCACGGTGATGACATT 46660
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGC 363562
|| | || ||||| || || || || | | || | | ||| ||||| || || |||
Sbjct 46661 GAGTCTGCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCTTCGC 46718
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622
| || ||| || || ||||| | || | ||| || | || ||||| || | | |
Sbjct 46719 CTACGCTGTTCAGCGCCGGAACACCCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACA 46778
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
||||||| || ||| || || |||| ||||| | |||| || || | || ||||
Sbjct 46779 TGAAGGATGACAGCATTGATGGCATCTACGACACCTTGAAGACCTGCGCCATGATCTCCA 46838
Query 363683 AGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACA 363739
|||| || ||||| || || | | || || || | || || || | | || ||||
Sbjct 46839 AGAACGCTGGCGGCATCGGACTCAACGTTC-ACCGCATCCGCGCGACTGGAGCA--TACA 46895
Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799
| |||| ||| ||| || || || || || |||||||| ||||||||| |||| |
Sbjct 46896 TCAGCGGTACAAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACA 46955
Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859
| || | |||||||||||||| || ||||| || || || || ||||| |||
Sbjct 46956 CCGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTACATCG 47015
Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919
|||| || || ||| | || || | || ||||| || ||| ||||| ||||
Sbjct 47016 AGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGG 47075
Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979
| | ||||| || ||| ||||||| | || ||||| |||| | || |||||||| |
Sbjct 47076 AGGTTCGTGCCCGCGATTTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAAGCGTG 47135
Query 363980 TGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038
| || |||| | | |||| | | | ||||| ||||| || || ||||| | |||
Sbjct 47136 TTGA-GCAGAACACCACTTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGAT 47194
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098
|| | || | || | | | || ||||| || || ||||| |||| ||||
Sbjct 47195 GTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGT 47254
Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
||||| | | ||| |||||||| |||| |||||| | || | |||| ||||| ||
Sbjct 47255 GAGACAGTCCGCGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGC 47314
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218
|| || || || | ||||| || | |||| ||||| ||||||| || || | ||
Sbjct 47315 ACGCCATACATCCTCTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAGAACTTGGGG 47374
Query 364219 ACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
|| | || |||| |||||| || |||||||| || || ||||| ||||| || |||
Sbjct 47375 ACCA-TCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCTGATGAGGT 47433
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-GTAC----- 364331
||||| || |||||||| || |||| || || | | || | || | ||
Sbjct 47434 CGCCGTGTGCAACCTTGCATCTCTCGCCCTCCCCACCTACGTCGACATTGAGAACGAGCG 47493
Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
||| ||| | | || | | || || | | || || | ||||| |
Sbjct 47494 TTTCGACTTTGACAAGCTCCACCAGGTCACTCAAACCGTCACCAAGAACTTGAACAAGAT 47553
Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450
||||| || | || ||| | || || || || | | || | ||||| || |
Sbjct 47554 CATCGAGGTCAACCACTACCCAGTGCCAGAGGCTCGCAAGAGC-AACTTCCGTCACCGTC 47612
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510
| || ||||| ||||| | || || || || | ||| || || ||| | || |
Sbjct 47613 CCATCGGTCTCGGTGTCAACGGTCTTGCCGATGCTTTCTTGGCTCTGCGCATGCCTTTCG 47672
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| || ||||| ||||| || || | ||||||| || || || ||| || ||
Sbjct 47673 ACTCTCCTGAGGCTCGCCAGCTCAACATTCAGATCTTCGAGACCATCTATCACGCTGCTC 47732
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGT 364627
| || ||||| || ||| | || | ||| ||| ||| || || ||||| |
Sbjct 47733 TCACCGCTTCATGCGATCTCGC---TGCTAAGCTTGGACCATACGAGACATACGAGGGCT 47789
Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687
| || |||| |||| | | |||| || | ||| ||| || || ||| | |
Sbjct 47790 CTCCCGTTTCCAAGGGCGAGCTTCAGTACGACATGTGGGGTGTGACTCCCACTGATCTCT 47849
Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTA 364747
|| |||||| | || |||| | |||| ||| ||||||||| ||| |
Sbjct 47850 GGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCACGGTGTTCGCAACTCGCTCCTCG 47909
Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807
|| |||||||| || || || || | |||||| | || ||||||||||||||| |
Sbjct 47910 TCGCTCCCATGCCGACTGCATCCACCTCGCAGATCATGGGTTTCAACGAGTGCTTCGAGC 47969
Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867
| | || ||||| | || || || || || || | || || || | ||| || ||
Sbjct 47970 CATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGCGAGTTCCAGGTTGTCAACC 48029
Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927
| | ||||||| | || || || |||||| |||| |||||||||| |
Sbjct 48030 CATGGTTGCTCAAGGACTTGGTTGAGCGTGGCCTGTGGTCAGACAACATGAAGAACCGCA 48089
Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987
||||||||| | |||||| | ||| ||||||| |||| || || || ||| ||
Sbjct 48090 TCATCGCCGATGGTGGTTCCATTCAGCGCATTCCAAACATTCCTGACGACCTCAAGGCTT 48149
Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGATC 365044
| ||||| || || ||||| || | ||| || ||| | | ||| | || || |
Sbjct 48150 TGTACAAGACTGTCTGGGAGATCAGCCAGCG---TCACATCGTCCAGATGTCCGCTGACC 48206
Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104
| ||||| || ||| |||| ||| | ||| | ||||| |||| || |
Sbjct 48207 GTGGTGCATTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCGACGATGG 48266
Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||| | || |||||| ||| ||| ||||| ||| || ||||| ||
Sbjct 48267 GCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 48318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303292263772286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |