Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1589 280 4e-70 >seq1589 Length=144912 Score = 280 bits (310), Expect = 4e-70 Identities = 1154/1792 (64%), Gaps = 37/1792 (2%) Strand=Plus/Plus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATT 363444 ||| ||| |||| |||||| |||||| ||| ||||| ||| | ||||| || | || Sbjct 46543 ATACTTT-GGATTCAAGACGCTGGAGAGATCATACCT-TCTGAGGATCAACGGCAAGGTT 46600 Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504 | || | || || || ||| | |||||||||||| |||| ||||| | || || Sbjct 46601 GCCGAGAGACCACAACAGATGATCATGCGTGTTGCTGTTGGCATCCACGGTGATGACATT 46660 Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGC 363562 || | || ||||| || || || || | | || | | ||| ||||| || || ||| Sbjct 46661 GAGTCTGCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCTTCGC 46718 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622 | || ||| || || ||||| | || | ||| || | || ||||| || | | | Sbjct 46719 CTACGCTGTTCAGCGCCGGAACACCCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACA 46778 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| || ||| || || |||| ||||| | |||| || || | || |||| Sbjct 46779 TGAAGGATGACAGCATTGATGGCATCTACGACACCTTGAAGACCTGCGCCATGATCTCCA 46838 Query 363683 AGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACA 363739 |||| || ||||| || || | | || || || | || || || | | || |||| Sbjct 46839 AGAACGCTGGCGGCATCGGACTCAACGTTC-ACCGCATCCGCGCGACTGGAGCA--TACA 46895 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 | |||| ||| ||| || || || || || |||||||| ||||||||| |||| | Sbjct 46896 TCAGCGGTACAAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACA 46955 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 | || | |||||||||||||| || ||||| || || || || ||||| ||| Sbjct 46956 CCGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTACATCG 47015 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || || ||| | || || | || ||||| || ||| ||||| |||| Sbjct 47016 AGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGG 47075 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 | | ||||| || ||| ||||||| | || ||||| |||| | || |||||||| | Sbjct 47076 AGGTTCGTGCCCGCGATTTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAAGCGTG 47135 Query 363980 TGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 | || |||| | | |||| | | | ||||| ||||| || || ||||| | ||| Sbjct 47136 TTGA-GCAGAACACCACTTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGAT 47194 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 || | || | || | | | || ||||| || || ||||| |||| |||| Sbjct 47195 GTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGT 47254 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 ||||| | | ||| |||||||| |||| |||||| | || | |||| ||||| || Sbjct 47255 GAGACAGTCCGCGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGC 47314 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || || || || | ||||| || | |||| ||||| ||||||| || || | || Sbjct 47315 ACGCCATACATCCTCTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAGAACTTGGGG 47374 Query 364219 ACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || | || |||| |||||| || |||||||| || || ||||| ||||| || ||| Sbjct 47375 ACCA-TCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCTGATGAGGT 47433 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-GTAC----- 364331 ||||| || |||||||| || |||| || || | | || | || | || Sbjct 47434 CGCCGTGTGCAACCTTGCATCTCTCGCCCTCCCCACCTACGTCGACATTGAGAACGAGCG 47493 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 ||| ||| | | || | | || || | | || || | ||||| | Sbjct 47494 TTTCGACTTTGACAAGCTCCACCAGGTCACTCAAACCGTCACCAAGAACTTGAACAAGAT 47553 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450 ||||| || | || ||| | || || || || | | || | ||||| || | Sbjct 47554 CATCGAGGTCAACCACTACCCAGTGCCAGAGGCTCGCAAGAGC-AACTTCCGTCACCGTC 47612 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | || ||||| ||||| | || || || || | ||| || || ||| | || | Sbjct 47613 CCATCGGTCTCGGTGTCAACGGTCTTGCCGATGCTTTCTTGGCTCTGCGCATGCCTTTCG 47672 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | || ||||| ||||| || || | ||||||| || || || ||| || || Sbjct 47673 ACTCTCCTGAGGCTCGCCAGCTCAACATTCAGATCTTCGAGACCATCTATCACGCTGCTC 47732 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGT 364627 | || ||||| || ||| | || | ||| ||| ||| || || ||||| | Sbjct 47733 TCACCGCTTCATGCGATCTCGC---TGCTAAGCTTGGACCATACGAGACATACGAGGGCT 47789 Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687 | || |||| |||| | | |||| || | ||| ||| || || ||| | | Sbjct 47790 CTCCCGTTTCCAAGGGCGAGCTTCAGTACGACATGTGGGGTGTGACTCCCACTGATCTCT 47849 Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTA 364747 || |||||| | || |||| | |||| ||| ||||||||| ||| | Sbjct 47850 GGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCACGGTGTTCGCAACTCGCTCCTCG 47909 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || |||||||| || || || || | |||||| | || ||||||||||||||| | Sbjct 47910 TCGCTCCCATGCCGACTGCATCCACCTCGCAGATCATGGGTTTCAACGAGTGCTTCGAGC 47969 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | || ||||| | || || || || || || | || || || | ||| || || Sbjct 47970 CATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGCGAGTTCCAGGTTGTCAACC 48029 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | | ||||||| | || || || |||||| |||| |||||||||| | Sbjct 48030 CATGGTTGCTCAAGGACTTGGTTGAGCGTGGCCTGTGGTCAGACAACATGAAGAACCGCA 48089 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 ||||||||| | |||||| | ||| ||||||| |||| || || || ||| || Sbjct 48090 TCATCGCCGATGGTGGTTCCATTCAGCGCATTCCAAACATTCCTGACGACCTCAAGGCTT 48149 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGATC 365044 | ||||| || || ||||| || | ||| || ||| | | ||| | || || | Sbjct 48150 TGTACAAGACTGTCTGGGAGATCAGCCAGCG---TCACATCGTCCAGATGTCCGCTGACC 48206 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | ||||| || ||| |||| ||| | ||| | ||||| |||| || | Sbjct 48207 GTGGTGCATTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCGACGATGG 48266 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || |||||| ||| ||| ||||| ||| || ||||| || Sbjct 48267 GCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 48318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303292263772286