Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 154 2e-32
>seq1655
Length=66175
Score = 154 bits (170), Expect = 2e-32
Identities = 479/733 (65%), Gaps = 9/733 (1%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
|| || || || || |||||||| |||| | | |||||||| || || || |||
Sbjct 52047 TCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAG-CGCACA 51989
Query 92987 -GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
|| || ||||| || | || || | |||||| |||||||| || | | ||| |||
Sbjct 51988 TGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTTC 51929
Query 93046 TACTCTACTATTTGGTGGTTT-TTGTACGACATAATTGTACATTAAGCACGCAAAGTCGG 93104
|| |||| ||| || |||| || | | ||| | ||| || |||||||
Sbjct 51928 AACAACCTGGTTTGATGGCTTGTTGTT-GAGGTGGGAGAACAGCAGGCAGGCGAAGTCGG 51870
Query 93105 TATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTC 93164
| || | || ||||| || || || | ||| ||| ||| || | || || | || |
Sbjct 51869 TGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGAC 51810
Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGG 93224
| || ||||| | ||| || || || || || || || || || || || || | ||
Sbjct 51809 CACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGATGG 51750
Query 93225 CTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAG 93284
| ||||| || | | ||| |||||| | | | || | ||||||| | |
Sbjct 51749 CGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCAGCG 51690
Query 93285 CCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGGTAATCT 93343
|||| || || || || || || || | |||| ||||| ||||| || |||||
Sbjct 51689 CCCAGTCAGCCTTCTTACGGATGCATGGGA-TGTTGTCGATGGCGTTGAAGAGGTACGTG 51631
Query 93344 CGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACA 93403
|| | | | || | |||||||||||||| | || || || | || || ||||
Sbjct 51630 CGTTGCTTGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGTGGATG 51571
Query 93404 TTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463
|||||||| |||||||| |||||||| || | || || | ||||||||| ||| |
Sbjct 51570 TTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCTCCA 51511
Query 93464 GAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAAT 93523
|| | ||| | ||| || |||||||| || |||||||| || || || || ||||
Sbjct 51510 CTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAGGCCAGG 51451
Query 93524 ATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCT 93580
| || || || ||| || || || | |||| | ||| ||| |||||
Sbjct 51450 ACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGAAGATCC 51391
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
|| || ||||||| || ||| | ||||| || || || || || || |||||||| | |
Sbjct 51390 TTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGC 51331
Query 93641 CATATGTCTTGAT 93653
|| || | | |||
Sbjct 51330 CAGATCTATGGAT 51318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556835233128520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |