Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1655 154 2e-32 >seq1655 Length=66175 Score = 154 bits (170), Expect = 2e-32 Identities = 479/733 (65%), Gaps = 9/733 (1%) Strand=Plus/Minus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 || || || || || |||||||| |||| | | |||||||| || || || ||| Sbjct 52047 TCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAG-CGCACA 51989 Query 92987 -GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || || ||||| || | || || | |||||| |||||||| || | | ||| ||| Sbjct 51988 TGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTTC 51929 Query 93046 TACTCTACTATTTGGTGGTTT-TTGTACGACATAATTGTACATTAAGCACGCAAAGTCGG 93104 || |||| ||| || |||| || | | ||| | ||| || ||||||| Sbjct 51928 AACAACCTGGTTTGATGGCTTGTTGTT-GAGGTGGGAGAACAGCAGGCAGGCGAAGTCGG 51870 Query 93105 TATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTC 93164 | || | || ||||| || || || | ||| ||| ||| || | || || | || | Sbjct 51869 TGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGAC 51810 Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGG 93224 | || ||||| | ||| || || || || || || || || || || || || | || Sbjct 51809 CACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGATGG 51750 Query 93225 CTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAG 93284 | ||||| || | | ||| |||||| | | | || | ||||||| | | Sbjct 51749 CGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCAGCG 51690 Query 93285 CCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGGTAATCT 93343 |||| || || || || || || || | |||| ||||| ||||| || ||||| Sbjct 51689 CCCAGTCAGCCTTCTTACGGATGCATGGGA-TGTTGTCGATGGCGTTGAAGAGGTACGTG 51631 Query 93344 CGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACA 93403 || | | | || | |||||||||||||| | || || || | || || |||| Sbjct 51630 CGTTGCTTGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGTGGATG 51571 Query 93404 TTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 |||||||| |||||||| |||||||| || | || || | ||||||||| ||| | Sbjct 51570 TTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCTCCA 51511 Query 93464 GAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAAT 93523 || | ||| | ||| || |||||||| || |||||||| || || || || |||| Sbjct 51510 CTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAGGCCAGG 51451 Query 93524 ATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCT 93580 | || || || ||| || || || | |||| | ||| ||| ||||| Sbjct 51450 ACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGAAGATCC 51391 Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||||| || ||| | ||||| || || || || || || |||||||| | | Sbjct 51390 TTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGC 51331 Query 93641 CATATGTCTTGAT 93653 || || | | ||| Sbjct 51330 CAGATCTATGGAT 51318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556835233128520