Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 122 7e-23
>seq3230
Length=199858
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | ||||| || ||| |||| || ||||| ||| | |
Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || |||||||||||||| || || ||||| ||||||
Sbjct 170617 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCAA 170676
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | ||||| ||| || | || |||||||||
Sbjct 170677 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAAC 170736
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || |||| | || || || | || |||| |||||
Sbjct 170737 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGG 170783
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || || | |||||| | ||| || | ||
Sbjct 170125 ACTGGAAAGACCATCACGCTTGAGGTCGAGTCCTCGGATACCATCGACAATGTGAAGAGC 170184
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||||||||||||||| ||||| || || || || || || || || ||||| ||
Sbjct 170185 AAGATTCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAG 170244
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| || ||| |||||||| || || || |||||
Sbjct 170245 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATCCAGAAGGAGTCCAC 170297
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || ||| |||| | || ||||| | |
Sbjct 170329 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 170388
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || || ||||||||||| ||||| || || |||
Sbjct 170389 GACACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 170448
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || |||||||| || | || || ||||| ||||||| ||||||
Sbjct 170449 CAGCGATTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACGCTCTCCGACTACAAC 170508
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||| ||
Sbjct 170509 ATCCAGAAGGAATCGAC 170525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419709211007245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |