Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 118 2e-21
seq2425 107 4e-18
seq2829 89.7 1e-12
>seq1655
Length=66175
Score = 118 bits (130), Expect = 2e-21
Identities = 270/401 (67%), Gaps = 8/401 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||||| | || ||||| |||||| ||||||||||||||||||
Sbjct 52149 TCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATAAAGTCGAAGGGGTTTGTG 52090
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||||| | | ||| ||||| | || || ||||| || || ||||| |
Sbjct 52089 GCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACGGTCGGCGACGAACTCGATG 52030
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || | | |||||| || | | ||| || | || || ||
Sbjct 52029 TACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGCACATGGGAGGGCGTCTGTGAGA 51970
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAG---AGAC 251799
|| |||| ||| || |||| ||||| | | || ||||| | || | ||
Sbjct 51969 AACTCCTGCTCGATGACAACGGCCTCGGTGATGA-TGTCTTCAAC--AACCTGGTTTGAT 51913
Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859
||||||| | || | ||| |||| || | | || | ||||| ||||||||
Sbjct 51912 GGCTTGTTGTTGAGGTGGGAGAACAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCA 51853
Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919
|| ||||| ||||||||| | ||||| ||||| | ||||| ||| | | ||||
Sbjct 51852 CGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAACCAG 51793
Query 251920 AAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGA 251959
||||| | ||| || ||||| ||||| | | |||||||
Sbjct 51792 AAGATGGACGC-GAATGATCCGGAGAAGAAGATGCCCTCGA 51753
>seq2425
Length=97746
Score = 107 bits (118), Expect = 4e-18
Identities = 138/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| |||||||| || || || || || || || ||||||||||| |||||||||| ||
Sbjct 62149 TCATCGGACCCAACGGAGCCGGAAAATCAACTCTGATCAAAGTCCTCACTGGCGAGA-CC 62091
Query 280234 AGGCCACTG-AGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
||||| | |||| || |||||| |||||| |||| || | || || |||
Sbjct 62090 GTGCCACAGCAGGGCAGAGTCGAGAAGCACCCCAACTTGCGTATCGGGTATATCAAGCAG 62031
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| | | ||| |||||| ||| |||| | |||||| ||||||||| | || |||
Sbjct 62030 CACGCCCTGGAGCACGTCGAGATGCACATGGAGAAGACTCCCAACCAATACCTGCAATGG 61971
Query 280353 CGCTATGC 280360
|| || ||
Sbjct 61970 CGTTACGC 61963
>seq2829
Length=486301
Score = 89.7 bits (98), Expect = 1e-12
Identities = 172/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||| || |||| ||| | || || |||| ||||| |||| |||
Sbjct 336447 GGCGAGGATCTCTGCAACTGCACATTCAACTTGGCCTACGGTGCCAAGATCTTGCTCAAC 336506
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | ||||||||||| | || || ||||| |||| ||||| || |
Sbjct 336507 CAGACCCATCTCCGCCTCAAGCGTGGCCAGCGCTACGGTCTGCTCGGACCCAACGGCTCC 336566
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||||| ||||||||||| |||| ||| | || || ||||| || |||
Sbjct 336567 GGCAAGACGACTCTCATGCGCGCCATCAACAACGAGCAGGTCGAGGGTTTTCCCAA-GCA 336625
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583
||||| | ||| || || || ||||||||| | ||| | || | | || | ||
Sbjct 336626 GAGCGAGGTCAAGACTGTTTACGTCGAGCACGACTTGGACGCTGCTGACACTGAGATGAC 336685
Query 279584 TGTGTTCGACT 279594
||| ||||||
Sbjct 336686 TGTCATCGACT 336696
Score = 89.7 bits (98), Expect = 1e-12
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || || | ||||| || ||||| ||||| || ||||| || || |||| |||||
Sbjct 337262 CTCCCGTATCGCGGTCATCGGTCCCAACGGTGCTGGCAAGTCGACTCTTGTCAATGTCCT 337321
Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTC-CGTTTGGAAGCATCCCAACATGCGGATGG 280278
||| || ||| | || ||| | |||| ||| | |||| ||||| || || |
Sbjct 337322 GACCGGTGAG-CTCATACCAACCAAGGGTGACGTCTACCAGCACGAGAACATCCGTATCG 337380
Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338
| ||| || |||||||||||| ||| ||||| ||||||| |||| ||| || |
Sbjct 337381 CCTACATCAAGCAGCACGCTTTCGCCCATATCGATCACCACCTCGACAAGACCCCATCCG 337440
Query 280339 AATACATTCAGTGGCG 280354
| |||||||| |||||
Sbjct 337441 AGTACATTCAATGGCG 337456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027788429678993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |