Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 109 5e-19
>seq3230
Length=199858
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | || ||||| || || |||||||| |||
Sbjct 170558 ATACCACCACGAAGGCGGAGGACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCG 170499
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||||| ||||| || || ||| |||| | ||||||||||||||
Sbjct 170498 GAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGG 170439
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | || | |||||| | || ||
Sbjct 170438 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCCGACGACTCC 170379
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | ||| |||||||| || || || || || ||||||||
Sbjct 170378 ACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 170329
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || || || |||||||| |||
Sbjct 170330 ATACCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 170271
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | || || ||| ||||| || || || ||| ||||||| ||||| ||||| |||
Sbjct 170270 CTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGA 170211
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298
|||||||| || ||||| ||||||
Sbjct 170210 GGAATGCCCTCCTTGTCTTGAATCTT 170185
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || |||||||||||||| | || || || ||||| || || || ||| ||
Sbjct 170747 TCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 170688
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
||||| |||||||| ||||| || || ||||| ||||| |||||| || | |
Sbjct 170687 ATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 170628
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | ||||| | ||||| || |||| || | ||| |||||||| || || || ||
Sbjct 170627 TCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACG 170568
Query 114372 AAAATCTGCAT 114382
|| || |||||
Sbjct 170567 AATATTTGCAT 170557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420115592814876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |