Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3230 109 5e-19 >seq3230 Length=199858 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || ||||| || || |||||||| ||| Sbjct 170558 ATACCACCACGAAGGCGGAGGACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCG 170499 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||| ||||| || || ||| |||| | |||||||||||||| Sbjct 170498 GAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGG 170439 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||| | || || Sbjct 170438 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCCGACGACTCC 170379 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||| |||||||| || || || || || |||||||| Sbjct 170378 ACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 170329 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||| ||| Sbjct 170330 ATACCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 170271 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| ||||| || || || ||| ||||||| ||||| ||||| ||| Sbjct 170270 CTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGA 170211 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298 |||||||| || ||||| |||||| Sbjct 170210 GGAATGCCCTCCTTGTCTTGAATCTT 170185 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||||||||| | || || || ||||| || || || ||| || Sbjct 170747 TCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 170688 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||| |||||||| ||||| || || ||||| ||||| |||||| || | | Sbjct 170687 ATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 170628 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||||| || |||| || | ||| |||||||| || || || || Sbjct 170627 TCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACG 170568 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 170567 AATATTTGCAT 170557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420115592814876