Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 141 2e-28
>seq1655
Length=66175
Score = 141 bits (156), Expect = 2e-28
Identities = 555/864 (64%), Gaps = 23/864 (3%)
Strand=Plus/Plus
Query 242888 ATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAG 242947
|||| | || ||| | ||||| |||||||| | ||| | || |||||| |||||||
Sbjct 51318 ATCCATAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGA 51377
Query 242948 TTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATT 243007
| |||| | || | ||||||| | || ||||| |||||||| || |
Sbjct 51378 TCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCT 51437
Query 243008 TCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGC 243067
||||| ||| | || | || ||||| | ||||||||| || || | || || || |
Sbjct 51438 TCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCT-C 51496
Query 243068 A--GACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCA 243125
| || | ||| |||| || || | | || ||||| || || || | || |||
Sbjct 51497 ATTGAGCG-CTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCA 51555
Query 243126 AACATTCAACGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGACGCGCTTATTTC 243185
|| | | || ||||| || || ||| | || || ||||| | || ||
Sbjct 51556 AATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACA--TACATC 51613
Query 243186 AGAT-GAACAAG-AGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCAT 243243
|| | |||| | || | | || ||| |||||||||| ||||| || | | |
Sbjct 51614 AGCGAGCCCAAGCAACGCACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGT 51673
Query 243244 AACAAGGCAAAATGGGCTCAGAAGTGGCT--------AGAACCCGGTAAATCATTTGCTG 243295
|| ||||| | ||||| | | ||| | ||||| || | |||||
Sbjct 51674 AAGAAGGCTGACTGGGCGCTGCGATGGATCTCCGACAAGAACTCGA-----CCTTTGCCT 51728
Query 243296 AGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CC 243354
|||||| |||||| | | | || || || | || ||||| ||| ||| ||
Sbjct 51729 GCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTC-GCGTCC 51787
Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 243414
||||| ||| || ||| ||| | ||||| |||||| | || |||||| |||||
Sbjct 51788 ATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATC 51847
Query 243415 AGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAAC 243474
|| ||||||||| | ||| | |||| || ||| || | ||| | |||
Sbjct 51848 TCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTCTCCCACCTCAACAAC 51907
Query 243475 AAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAA 243534
|||| | || | | || || | |||||||| || || |||| | ||| ||||
Sbjct 51908 AAGCCATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAG 51967
Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594
|| | ||||| | ||||| ||| | || |||||| | | |||||| | |||
Sbjct 51968 TTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAG 52027
Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654
|||||||| ||||| |||||||| | || | || || || | |||| ||||||
Sbjct 52028 TACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAAC 52087
Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714
||| |||||||| | |||||||||| ||| || || ||| ||||| |||||||||
Sbjct 52088 GCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTC 52147
Query 243715 GAAAAGCGTGTCAGTGATTATCAA 243738
|| ||||||||| | || || |||
Sbjct 52148 GAGAAGCGTGTCGGCGACTACCAA 52171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102828098122550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |