Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 185 1e-41
seq1589 123 3e-23
>seq1655
Length=66175
Score = 185 bits (204), Expect = 1e-41
Identities = 545/825 (66%), Gaps = 39/825 (5%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| || || || | | | ||| ||||||||
Sbjct 52168 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCAT 52109
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGAG 125874
||| || || ||||| | | ||| | | ||| || | | | | ||||||
Sbjct 52108 AAAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 52052
Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934
||| || | |||| |||| ||||||| |||| || | |||||| |||| |||
Sbjct 52051 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 51992
Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994
||||||||| ||||| || ||| ||| ||| || | ||||| || | |||| |
Sbjct 51991 ACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTC 51932
Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAG----AGTTCCAC----- 126045
| || || || ||| | || || | |||| | || | |
Sbjct 51931 TTCAA-------CAACCT-GGTTTGATG-GCTTGTTGTTGAGGTGGGAGAACAGCAGGCA 51881
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
||| || || ||| | |||||||||||||||||||| || || |||||| || ||
Sbjct 51880 GGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCC 51821
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| ||||||||||||||||| || | ||||| || |||||||||||
Sbjct 51820 GGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGAT 51761
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222
||||| | || || || | |||||| ||||||| ||| || ||||
Sbjct 51760 GCCCTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG---TCGAGTTCTTGTCGGA 51704
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
| ||| || |||||| | ||||| || ||| || |||| | | | ||| || |
Sbjct 51703 GATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTT 51644
Query 126283 AAAGA-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341
|||| || | | | || || || || ||||||| |||| ||||| || ||||
Sbjct 51643 GAAGAGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATG 51585
Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400
| ||| ||||| | | ||| ||| || || ||||||| |||| || |||
Sbjct 51584 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCGGGG 51526
Query 126401 ATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
||||| ||||| || | || | | | ||| |||||| || ||||||||||| |
Sbjct 51525 ATCTGCACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGC 51467
Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTT 126516
||| || || ||||||| | ||||| | || | ||||| ||| | ||
Sbjct 51466 AGCGAAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTT 51407
Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||||| ||||||||| || ||||| | |||||| || |||||
Sbjct 51406 CCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362
>seq1589
Length=144912
Score = 123 bits (136), Expect = 3e-23
Identities = 471/724 (65%), Gaps = 24/724 (3%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||||||||| |||||||| ||| ||||| ||| || | ||||||
Sbjct 47988 TAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGAT 47929
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| || |||||||| || | ||| || ||| || | ||| | || || ||
Sbjct 47928 GCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCC 47869
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCACATATCAAACTG 114117
||||| ||| ||||||| || || | || || | ||| ||||| || ||||
Sbjct 47868 TTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACACCC---CACATGTCGTACTG 47813
Query 114118 GAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT---C 114174
|| || | ||| | || || ||||| ||||||||||||| || || || |
Sbjct 47812 AAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTAGC 47756
Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234
|| | ||| | || ||| || |||||||| || ||||| || || || ||
Sbjct 47755 AGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTT 47696
Query 114235 CAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA--AATAAATACATCCGC 114291
| || | | |||| || || || | | || || | || ||| |||| ||
Sbjct 47695 GAGCTGGCGAG-CCTCAGGAGAGTCGAAAGGCATGCG-CAGAGCCAAGAAAG-CATCGGC 47639
Query 114292 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC 114351
||||| | ||||||||| || || || || || | | || ||| ||||| |||
Sbjct 47638 AAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTG 47580
Query 114352 -CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410
||| || || || ||||| | | | || | || |||||||| | ||||
Sbjct 47579 GCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGA 47520
Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGG 114469
| || ||||| || | || |||| || || ||| | ||| || | || |||
Sbjct 47519 CCTGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGG 47461
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
|||| || || || || ||||| | | |||||| | |||||||||| || || ||
Sbjct 47460 GCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCG 47401
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| || | || || || ||||| ||||||||||| || || ||| |||
Sbjct 47400 GTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCA 47341
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| || ||||||||||| || ||||| || || | || ||| || || | |
Sbjct 47340 GCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTAC 47281
Query 114650 CAGA 114653
||||
Sbjct 47280 CAGA 47277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597326174002840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |