Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1655 185 1e-41 seq1589 123 3e-23 >seq1655 Length=66175 Score = 185 bits (204), Expect = 1e-41 Identities = 545/825 (66%), Gaps = 39/825 (5%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| || || || | | | ||| |||||||| Sbjct 52168 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCAT 52109 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGAG 125874 ||| || || ||||| | | ||| | | ||| || | | | | |||||| Sbjct 52108 AAAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 52052 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 ||| || | |||| |||| ||||||| |||| || | |||||| |||| ||| Sbjct 52051 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 51992 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 ||||||||| ||||| || ||| ||| ||| || | ||||| || | |||| | Sbjct 51991 ACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTC 51932 Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAG----AGTTCCAC----- 126045 | || || || ||| | || || | |||| | || | | Sbjct 51931 TTCAA-------CAACCT-GGTTTGATG-GCTTGTTGTTGAGGTGGGAGAACAGCAGGCA 51881 Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 ||| || || ||| | |||||||||||||||||||| || || |||||| || || Sbjct 51880 GGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCC 51821 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| ||||||||||||||||| || | ||||| || ||||||||||| Sbjct 51820 GGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGAT 51761 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| | || || || | |||||| ||||||| ||| || |||| Sbjct 51760 GCCCTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG---TCGAGTTCTTGTCGGA 51704 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| || |||||| | ||||| || ||| || |||| | | | ||| || | Sbjct 51703 GATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTT 51644 Query 126283 AAAGA-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 |||| || | | | || || || || ||||||| |||| ||||| || |||| Sbjct 51643 GAAGAGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATG 51585 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 | ||| ||||| | | ||| ||| || || ||||||| |||| || ||| Sbjct 51584 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCGGGG 51526 Query 126401 ATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||||| ||||| || | || | | | ||| |||||| || ||||||||||| | Sbjct 51525 ATCTGCACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGC 51467 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTT 126516 ||| || || ||||||| | ||||| | || | ||||| ||| | || Sbjct 51466 AGCGAAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTT 51407 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| ||||||||| || ||||| | |||||| || ||||| Sbjct 51406 CCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362 >seq1589 Length=144912 Score = 123 bits (136), Expect = 3e-23 Identities = 471/724 (65%), Gaps = 24/724 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||||||||| |||||||| ||| ||||| ||| || | |||||| Sbjct 47988 TAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGAT 47929 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || |||||||| || | ||| || ||| || | ||| | || || || Sbjct 47928 GCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCC 47869 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCACATATCAAACTG 114117 ||||| ||| ||||||| || || | || || | ||| ||||| || |||| Sbjct 47868 TTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACACCC---CACATGTCGTACTG 47813 Query 114118 GAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT---C 114174 || || | ||| | || || ||||| ||||||||||||| || || || | Sbjct 47812 AAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTAGC 47756 Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234 || | ||| | || ||| || |||||||| || ||||| || || || || Sbjct 47755 AGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTT 47696 Query 114235 CAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA--AATAAATACATCCGC 114291 | || | | |||| || || || | | || || | || ||| |||| || Sbjct 47695 GAGCTGGCGAG-CCTCAGGAGAGTCGAAAGGCATGCG-CAGAGCCAAGAAAG-CATCGGC 47639 Query 114292 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC 114351 ||||| | ||||||||| || || || || || | | || ||| ||||| ||| Sbjct 47638 AAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTG 47580 Query 114352 -CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 ||| || || || ||||| | | | || | || |||||||| | |||| Sbjct 47579 GCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGA 47520 Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGG 114469 | || ||||| || | || |||| || || ||| | ||| || | || ||| Sbjct 47519 CCTGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGG 47461 Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 |||| || || || || ||||| | | |||||| | |||||||||| || || || Sbjct 47460 GCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCG 47401 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || || | || || || ||||| ||||||||||| || || ||| ||| Sbjct 47400 GTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCA 47341 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| || ||||||||||| || ||||| || || | || ||| || || | | Sbjct 47340 GCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTAC 47281 Query 114650 CAGA 114653 |||| Sbjct 47280 CAGA 47277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597326174002840