Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 131 2e-25
>seq3230
Length=199858
Score = 131 bits (144), Expect = 2e-25
Identities = 175/238 (74%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032
|| ||| | ||||| | | ||| | |||||| |||| ||||||||||| ||||| |||
Sbjct 170792 ATCTATTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTG 170733
Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092
||||||| || ||||| |||| || |||||||| || ||||| ||||| ||||| ||
Sbjct 170732 TAATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGA 170673
Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGC 42150
|| | ||| | | ||||||| | ||| | || | |||| ||| | | | ||||||
Sbjct 170672 TCCGGTGGGATTCCTTCCTTGT-CTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTG 170615
Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || | ||||| || ||||| || || ||||| || || ||||||||
Sbjct 170614 ATGATTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543187859742320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |