Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3230 96.9 3e-15 >seq3230 Length=199858 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | |||||||| || || |||||||| || | || ||||| ||||| Sbjct 170540 AGGACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCT 170481 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||||||||| | || | ||||| ||||| || ||||| || || || || Sbjct 170480 TCGAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 170421 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| ||| || | || | ||| || ||||| || | || | | Sbjct 170420 TGGATCTTCGACTTAACATTGTCGATGGTGT--CCGACGACTCCACCTCCAAGGTGATCG 170363 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| | || || ||||| || ||||| Sbjct 170362 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 170329 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || |||||||||||||| | | || || |||| ||||||||||||||||| | Sbjct 170747 TCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 170688 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||| || || || || |||||||| || ||||| || || ||| || Sbjct 170687 ATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 170628 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || ||||| | || | ||||||||||| | || || ||| Sbjct 170627 TCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACG 170568 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 170567 AATATTTGCAT 170557 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || ||||||| | || ||||||||||| ||| Sbjct 170297 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCG 170238 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| |||||||| || || || ||||| || || ||| Sbjct 170237 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGAATCTTGCTCTTC 170178 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 ||| || | ||||| || || || || | || | |||||| || |||| Sbjct 170177 ACATTGTCGATGGTATCCGAGGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCA 170123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499621860058120